Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09333
- Subject:
- XR_939743.3
- Aligned Length:
- 3814
- Identities:
- 2006
- Gaps:
- 1807
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTGCCAGTCTCCTCCACCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCTAACCTGAGAGCCTGTGGAACCTGCCCGTCTCCCCTCCTCCATCAGACACACCTGCCTAGGAAACAGGAA 148
Query 1 -----------------------------ATGGCGTATTACCAGGAGCCTTCAGTGGAGACCTCCATCATCAAG 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGACCTCGGAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGGAGCCTTCAGTGGAGACCTCCATCATCAAG 222
Query 46 TTCAAAGACCAGGACTTTACCACCTTGCGGGATCACTGCCTGAGCATGGGCCGGACGTTTAAGGATGAGACATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCAAAGACCAGGACTTTACCACCTTGCGGGATCACTGCCTGAGCATGGGCCGGACGTTTAAGGATGAGACATT 296
Query 120 CCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGC 370
Query 194 CACAGGATCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGATATAAGCAGATTTGACATCCAACAAGGAGGC 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAGGATCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGATATAAGCAGATTTGACATCCAACAAGGAGGC 444
Query 268 GCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTGAT 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTGAT 518
Query 342 GGTCCAAAGCTTTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGTGGAAG 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTCCAAAGCTTTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGTGGAAG 592
Query 416 TGGTGATTGATGACCGCCTACCTGTCCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAG 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGTGATTGATGACCGCCTACCTGTCCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAG 666
Query 490 TTCTGGCCCTGCCTGCTGGAGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCT 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCTGGCCCTGCCTGCTGGAGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCT 740
Query 564 CGAGGATGCCCTGGTGGACCTCACAGGAGGCGTGATCACCAACATCCATCTGCACTCTTCCCCTGTGGACCTGG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGAGGATGCCCTGGTGGACCTCACAGGAGGCGTGATCACCAACATCCATCTGCACTCTTCCCCTGTGGACCTGG 814
Query 638 TGAAGGCAGTGAAGACAGCGACCAAGGCAGGCTCCCTGATAACCTGTGCCACTCCAAGTGGGCCAACAGATACA 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAAGGCAGTGAAGACAGCGACCAAGGCAGGCTCCCTGATAACCTGTGCCACTCCAAGTGGGCCAACAGATACA 888
Query 712 GCACAGGCGATGGAGAATGGGCTGGTGAGTCTCCATGCCTACACTGTGACTGGGGCTGAGCAGATTCAATACCG 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCACAGGCGATGGAGAATGGGCTGGTGAGTCTCCATGCCTACACTGTGACTGGGGCTGAGCAGATTCAATACCG 962
Query 786 AAGGGGCTGGGAAGAAATTATCTCCCTGTGGAACCCCTGGGGCTGGGGCGAGACCGAATGGAGAGGGCGCTGGA 859
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 963 AAGGGGCTGGGAAGAAATTATCTCCCTGTGGAACCCCTGGGGCTGGGGCGAGGCCGAATGGAGAGGGCGCTGGA 1036
Query 860 GTGATGGGTCTCAGGAGTGGGAGGAAACCTGTGATCCGCGGAAAAGCCAGCTACATAAGAAACGGGAAGATGGC 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGATGGGTCTCAGGAGTGGGAGGAAACCTGTGATCCGCGGAAAAGCCAGCTACATAAGAAACGGGAAGATGGC 1110
Query 934 GAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAATTCATCGCCATGTTTATATGTAGCGAAATTCCAATTAC 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAATTCATCGCCATGTTTATATGTAGCGAAATTCCAATTAC 1184
Query 1008 CCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAGCAAGTGATTCTAGGAAACA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAGCAAGTGATTCTAGGAAACA 1258
Query 1082 CTGCAGGAGGACCTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAGAGCCAATGGAAGGCACCAATGTTGTC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGCAGGAGGACCTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAGAGCCAATGGAAGGCACCAATGTTGTC 1332
Query 1156 GTGTGCGTCACAGTTGCTGTCACACCATCAAATTTGAAAGCAGAAGATGCAAAATTTCCACTCGATTTCCAAGT 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGTGCGTCACAGTTGCTGTCACACCATCAAATTTGAAAGCAGAAGATGCAAAATTTCCACTCGATTTCCAAGT 1406
Query 1230 GATTCTGGCTGGCTCACAGCGGTTCCGGGAGAAATTTCCACCCGTGTTTTTTTCCTCGTTCAGAAACACTGTCC 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATTCTGGCTGGCTCACAGCGGTTCCGGGAGAAATTTCCACCCGTGTTTTTTTCCTCGTTCAGAAACACTGTCC 1480
Query 1304 AAAGCTCAAATAATAAATTCCGCCGCAACTTCACCATGACTTACCATCTGAGCCCTGGGAACTATGTTGTGGTT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAGCTCAAATAATAAATTCCGCCGCAACTTCACCATGACTTACCATCTGAGCCCTGGGAACTATGTTGTGGTT 1554
Query 1378 GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCT 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCT 1628
Query 1452 GAGCAGCCATTTCAACCTCAGAATGAAGGGAAGCCCTTCAGAACATGGCTCCCAACAAAGCATTTTCAACAGAT 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAGCAGCCATTTCAACCTCAGAATGAAGGGAAGCCCTTCAGAACATGGCTCCCAACAAAGCATTTTCAACAGAT 1702
Query 1526 ATGCTCAGCAGAGGCTGGACATTGATGCCACCCAGCTTCAGGGCCTTCTCAACCAGGAGCTTCTAACAGGACCT 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATGCTCAGCAGAGGCTGGACATTGATGCCACCCAGCTTCAGGGCCTTCTCAACCAGGAGCTTCTAACAGGACCT 1776
Query 1600 CCAGGGGACATGTTCTCCTTAGATGAGTGCCGCAGCTTGGTGGCTCTGATGGAA-------------------- 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCAGGGGACATGTTCTCCTTAGATGAGTGCCGCAGCTTGGTGGCTCTGATGGAAGTATCCTTTGCGGTCATCCC 1850
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 1851 TCCCATGCTCTGAGCACCCCTCAGCTCTGTGGGCTTCCCCAGAGACCTAATTAGGACAGTAGGGAACCCTTTTC 1924
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 1925 CCACTCAGTATTTTCTCTTCTTCCCTGTCCTTGAGTTTCTGGGGATTCTCTACTAACTCACTAACATACCACAG 1998
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 1999 CAACAATGATAATAGTTACCATCTATCAAGCACCTACTATGTGCTGATCAGTGTACTGGGGTGTGTGTGTGTGT 2072
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2073 GTGTGTGTGTGTGTGTGTGTGTGTGTCCTTATAATTCTTGAAGCAATCCCTCTGATACAAAAAAGTATCATCTC 2146
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2147 ATAATACAGTAGAAGAAACAGGAGTTCAGAGAGGTTAAGTAATTTGCCCAGATCACACAGCTAGTCAGGACTCA 2220
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2221 TGCTCAGATTTGAAGTTGGAGCTTTCAGCCTCCAAAGTCGATGCTCTAACCTTATCCTAAACCGCCCCTTTATA 2294
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2295 GCACCGTTGGGAACTATTTTCCCTTTTACCCATTCACTTCCCACTGGAGGAGTCTCCATTATTTAAATTTCTTA 2368
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2369 CTTCAACAAGTCCCCAATTCAATCAAGATAACTACCACCAAAACATGGAAAACTGCCTGGTCTACACAGCAGTT 2442
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2443 GCACCCCAGCATTGCTATGCTGCATTCACAGCGGGAGACGCTGGGCAGAGGCAGTTCAGAGACTCACTCCAGGC 2516
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2517 CCGTGGCTACAAGTGTAGGACCAAGAATTGAACCCCAGACTCCTGACCCTCCTCCTGATTTCCATTCCCCAGTG 2590
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2591 AGCCATCCTCTTCCTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCCAGATG 2664
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2665 CTGCCCTGCCAGCCCCTCACTCGGCAGTGTGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAA 2738
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2739 GGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGGGCTTTTTTGATGAAATCATAAATCAGGCCCT 2812
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2813 GTCTCTGCTGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCCAAATGGTCCTCA 2886
Query 1654 -------------------------------------------------------------------------- 1653
Sbjct 2887 CAGTGCCACGGCCCGGGGATGGCAGCCCCTCTGCACCTTGCACGCTGGCTGGTTCACTCTTAACTCCTTACCCA 2960
Query 1654 -CTGAAAGTGAATGGGCGGCTAGACCAAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATG 1726
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCTGAAAGTGAATGGGCGGCTAGACCAAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATG 3034
Query 1727 TTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCCTGAGCTCGGACTTGTGGAAGGCCATAGAGAATACAGAC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCCTGAGCTCGGACTTGTGGAAGGCCATAGAGAATACAGAC 3108
Query 1801 TTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGACCCTCAGGTACAGCGACAGCGTCGGCAG 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGACCCTCAGGTACAGCGACAGCGTCGGCAG 3182
Query 1875 GGTCAGCTTCCCCAGCCTGGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTCTA 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGTCAGCTTCCCCAGCCTGGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTCTA 3256
Query 1949 AGGATGGAAAAGGACTCTACCTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAAC--------------- 2007
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 AGGATGGAAAAGGACTCTACCTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGAA 3330
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3331 AGCAGACCCATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTG 3404
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3405 CCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAGCCTG 3478
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3479 GGTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATG 3552
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3553 TATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAGGAGATGTCTCCCTGTGGGAAAGGAGAAGAGAAGTTGTCTC 3626
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3627 TGAGTCCCCTGTCACCAGTTGGATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCT 3700
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3701 ATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGAATAATTACACTATCTTATGTCTGGATCCTGATGATT 3774
Query 2008 ---------------------------------------- 2007
Sbjct 3775 TCACAGCTAAATGGCAAAAATAAAACATGTTTCCCATAAA 3814
