Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09342
• Subject: XM_011540363.3
• Aligned Length: 1144
• Identities: 471
• Gaps: 671

Alignment

Query    1  ------------------------ATGG------AGC-CCCAGAGAATCATGCCACCCTCAAAGCCTCATCCAC  43
                                    ||.|      |.| |||||| |||||||||||||||||||||||||||||
Sbjct    1  ATGAGTCACAGGAGTTTGTTGTACATAGTATTACATCACCCAGA-AATCATGCCACCCTCAAAGCCTCATCCAC  73

Query   44  CTGTCGTGGGCAAAGTGACTCATCACAGCATTGAATTATACTGGGATCTGGAAAAGAAAGCCAAACGCCAAGGA  117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   74  CTGTCGTGGGCAAAGTGACTCATCACAGCATTGAATTATACTGGGATCTGGAAAAGAAAGCCAAACGCCAAGGA  147

Query  118  CCTCAAGAGCAGTGGTTCAGGTTCTCGATTGAAGAAGAAGACCCCAAAATGCACACTTATGGTATCATTTATAC  191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  CCTCAAGAGCAGTGGTTCAGGTTCTCGATTGAAGAAGAAGACCCCAAAATGCACACTTATGGTATCATTTATAC  221

Query  192  GGGATATGCAACGAAGCATGTTGTTGAAGGTCTGGAACCAAGGACGCTGTACAGATTTCGCCTGAAGGTCACCA  265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  222  GGGATATGCAACGAAGCATGTTGTTGAAGGTCTGGAACCAAGGACGCTGTACAGATTTCGCCTGAAGGTCACCA  295

Query  266  GCCCCTCTGGGGAGTGTGAGTACAGCCCACTCGTCTCAGTGTCTACAACCA-----------------------  316
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct  296  GCCCCTCTGGGGAGTGTGAGTACAGCCCACTCGTCTCAGTGTCTACAACCAGGCCATCTCTGAGCAAGAGCCTT  369

Query  317  -------------------------------------------------------GAGAGCCCATAAGTAGTGA  335
                                                                   |||||||||||||||||||
Sbjct  370  GTAAAAATTAGGATGGTCACAAGTGTTCTCCACGGCCCACCCACTGAAAACACAGGAGAGCCCATAAGTAGTGA  443

Query  336  GCACTTGCACCGGGCTGTCAGTGTGAATGATGAAGATTTGCTGGTCCGAATACTTCAAGGAGGCCGTGTTAAGG  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  GCACTTGCACCGGGCTGTCAGTGTGAATGATGAAGATTTGCTGGTCCGAATACTTCAAGGAGGCCGTGTTAAGG  517

Query  410  TTGATGTTCCCAATAAGTTTGGCTTTACCGCTCTGATGGTTGCTGCCCAGAAAGGATACACCAGGCTTGTGAAA  483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct  518  TTGATGTTCCCAATAAGTTTGGCTTTACCGCTCTGATGGTTGCTGCCCAGAAAGGATACACCAGG---------  582

Query  484  ATCCTAGTTTCTAATGGCACAGACGTGAATCTGAAGAATGGAAGTGGCAAGGACAGTCTAATGCTGGCGTGCTA  557
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  558  TGCGGGACACCTAGATGTTGTGAAATATCTCCGAAGACATGGCGCTTCTTGGCAGGCTAGAGACCTGGGAGGCT  631
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  632  GTACAGCTCTGCACTGGGCTGCAGATGGAGGCCACTGCAGTGTGATTGAGTGGATGATAAAGGATGGCTGTGAG  705
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  706  GTAGACGTCGTGGACACTGGTTCAGGATGGACCCCACTCATGAGAGTCTCTGCGGTGTCGGGAAATCAGAGGGT  779
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  780  GGCCTCTCTTCTAATTGATGCTGGGGCCAATGTGAATGTGAAGGACAGAAATGGAAAGACGCCCCTTATGGTGG  853
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  854  CTGTGTTAAATAATCATGAAGAGTTAGTTCAGTTACTTCTTGACAAAGGGGCAGATGCAAGTGTAAAAAATGAG  927
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query  928  TTCGGCAAAGGTGTCCTAGAAATGGCCAGAGTTTTTGACAGACAGAGTGTAGTCTCCTTATTAGAAGAAAGGAA  1001
                                                                                      
Sbjct  583  --------------------------------------------------------------------------  582

Query 1002  AAAAAAGCAGAGGCCAAAGAAGTCTTGTGTCTGC  1035
                                              
Sbjct  583  ----------------------------------  582