Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09342
- Subject:
- XR_945878.3
- Aligned Length:
- 2038
- Identities:
- 1032
- Gaps:
- 1004
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCGGCTCCCGATTCCCGGGAGGGCGGCCCAGGGCCGGCGCCTTACCCGCGGGCAGGCCCACTCGCCCGACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACGCCGCGGGTCGGCGACAGCGGGGACCGCGGGTCGGCGACGTCGGGGCACAGGTCCTGCGGGGCCGCGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCAGGGAGGGCGCGACCGCCTGACCGGGCTTCAGGAGCAGTGTCCTCAGCCGGTGACCTGGCCGCTACCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTCAGTGTCCCCGGCGACGCGCGGGTCCTCACGCGCTCCCTCACTTCCTGCGGCTTTTGGTCCCTCCCGCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGTCCCTTTAGTTCTGCCCACTTCGCCTCCGGGTTGTCAGGGCAACCGTAGCGACGCCGGCCCTGGCTGAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGTTAGGAGTCCGGGGGTTCGCCCGCGGAGGCCGGGGAGCAGCCGACCATGGAGCCCCAGATGGGCTGTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAATCATTTGTTCAACACTGATGTCGTGATACAAGGACGTGAAGATGTGAGTCATTGTGACATCACCAGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAATTGCTGGGATTCAGTGAGATGACTCACAGTAAGAGGTTTGGGGGTACGTGTGAAGGTTTGTCACACAGATA 592
Query 1 ---------------------------ATGG------AGC-CCCAGAGAATCATGCCACCCTCAAAGCCTCATC 40
||.| |.| |||||| ||||||||||||||||||||||||||
Sbjct 593 AATATGAGTCACAGGAGTTTGTTGTACATAGTATTACATCACCCAGA-AATCATGCCACCCTCAAAGCCTCATC 665
Query 41 CACCTGTCGTGGGCAAAGTGACTCATCACAGCATTGAATTATACTGGGATCTGGAAAAGAAAGCCAAACGCCAA 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 CACCTGTCGTGGGCAAAGTGACTCATCACAGCATTGAATTATACTGGGATCTGGAAAAGAAAGCCAAACGCCAA 739
Query 115 GGACCTCAAGAGCAGTGGTTCAGGTTCTCGATTGAAGAAGAAGACCCCAAAATGCACACTTATGGTATCATTTA 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 GGACCTCAAGAGCAGTGGTTCAGGTTCTCGATTGAAGAAGAAGACCCCAAAATGCACACTTATGGTATCATTTA 813
Query 189 TACGGGATATGCAACGAAGCATGTTGTTGAAGGTCTGGAACCAAGGACGCTGTACAGATTTCGCCTGAAGGTCA 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 TACGGGATATGCAACGAAGCATGTTGTTGAAGGTCTGGAACCAAGGACGCTGTACAGATTTCGCCTGAAGGTCA 887
Query 263 CCAGCCCCTCTGGGGAGTGTGAGTACAGCCCACTCGTCTCAGTGTCTACAACCA-------------------- 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 CCAGCCCCTCTGGGGAGTGTGAGTACAGCCCACTCGTCTCAGTGTCTACAACCAGGCCATCTCTGAGCAAGAGC 961
Query 317 ----------------------------------------------------------GAGAGCCCATAAGTAG 332
||||||||||||||||
Sbjct 962 CTTGTAAAAATTAGGATGGTCACAAGTGTTCTCCACGGCCCACCCACTGAAAACACAGGAGAGCCCATAAGTAG 1035
Query 333 TGAGCACTTGCACCGGGCTGTCAGTGTGAATGATGAAGATTTGCTGGTCCGAATACTTCAAGGAGGCCGTGTTA 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TGAGCACTTGCACCGGGCTGTCAGTGTGAATGATGAAGATTTGCTGGTCCGAATACTTCAAGGAGGCCGTGTTA 1109
Query 407 AGGTTGATGTTCCCAATAAGTTTGGCTTTACCGCTCTGATGGTTGCTGCCCAGAAAGGATACACCAGGCTTGTG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 AGGTTGATGTTCCCAATAAGTTTGGCTTTACCGCTCTGATGGTTGCTGCCCAGAAAGGATACACCAGGCTTGTG 1183
Query 481 AAAATCCTAGTTTCTAATGGCACAGACGTGAATCTGAAGAATGGAAGTGGCAAGGACAGTCTAATGCTGGCGTG 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 AAAATCCTAGTTTCTAATGGCACAGACGTGAATCTGAAGAATGGAAGTGGCAAGGACAGTCTAATGCTGGCGTG 1257
Query 555 CTATGCGGGACACCTAGATGTTGTGAAATATCTCCGAAGACATGGCGCTTCTTGGCAGGCTAGAGACCTGGGAG 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CTATGCGGGACACCTAGATGTTGTGAAATATCTCCGAAGACATGGCGCTTCTTGGCAGGCTAGAGACCTGGGAG 1331
Query 629 GCTGTACAGCTCTGCACTGGGCTGCAGATGGAGGCCACTGCAGTGTGATTGAGTGGATGATAAAGGATGGCTGT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 GCTGTACAGCTCTGCACTGGGCTGCAGATGGAGGCCACTGCAGTGTGATTGAGTGGATGATAAAGGATGGCTGT 1405
Query 703 GAG----------------------------------------------------------------------- 705
|||
Sbjct 1406 GAGATTTCCACATGACTGGCCTGGTGGCGGATGGATGATGTCAACATGAGTCTTTCCATATTCTGGCAGGTGGC 1479
Query 706 ----------------------------------------------------------------GTAGACGTCG 715
||||||||||
Sbjct 1480 TCACCTGATGCTTCTGAAGCCCATGGGAAGGACTTGAGAGCCAATCACCACCTTCTTCCCAAATGTAGACGTCG 1553
Query 716 TGGACACTGGTTCAGGATGGACCCCACTCATGAGAGTCTCTGCGGTGTCGGGAAATCAGAGGGTGGCCTCTCTT 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 TGGACACTGGTTCAGGATGGACCCCACTCATGAGAGTCTCTGCGGTGTCGGGAAATCAGAGGGTGGCCTCTCTT 1627
Query 790 CTAATTGATGCTGGGGCCAATGTGAATGTGAAGGACAGAAATGGAAAGACGCCCCTTATGGTGGCTGTGTTAAA 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 CTAATTGATGCTGGGGCCAATGTGAATGTGAAGGACAGAAATGGAAAGACGCCCCTTATGGTGGCTGTGTTAAA 1701
Query 864 TAATCATGAAGAGTTAGTTCAGTTACTTCTTGACAAAGGGGCAGATGCAAGTGTAAAAAATGAGTTCGGCAAAG 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 TAATCATGAAGAGTTAGTTCAGTTACTTCTTGACAAAGGGGCAGATGCAAGTGTAAAAAATGAGTTCGGCAAAG 1775
Query 938 GTGTCCTAGAAATGGCCAGAGTTTTTGACAGACAGAGTGTAGTCTCCTTATTAGAAGAAAGGAAAAAAAAGCAG 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 GTGTCCTAGAAATGGCCAGAGTTTTTGACAGACAGAGTGTAGTCTCCTTATTAGAAGAAAGGAAAAAAAAGCAG 1849
Query 1012 AGGCCAAAGAAGTCTTGTGTCTGC-------------------------------------------------- 1035
||||||||||||||||||||||||
Sbjct 1850 AGGCCAAAGAAGTCTTGTGTCTGCTGATGAGAGCACCACTCATCTGCGAAACGCACGTAAAACAAAGTGAACCG 1923
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 1924 TGACTGTTAAACTAGGGATGGGAAATTCTGCATCTTGGGGGGCTGTACATTTATTTATTTAGTTGAAGATTCAC 1997
Query 1036 ---------------------------------------- 1035
Sbjct 1998 TGATCCCACTTTGAAATACATCTTTTTACCTAAGCATGTG 2037
