Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09499
- Subject:
- XR_001753602.2
- Aligned Length:
- 2079
- Identities:
- 914
- Gaps:
- 1164
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACACCAGTTCCTCTTCCCCCTGAGTCGCTGGGTGCAGAGCCAGAGGAACGCCAGCGACCCCAGCAGCGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGACGGTGCTGGCCGTGGCCGCTGCGGCCCCCGTGTCCAGGTGGGCCAGGACGCAGCCTCTGGGCGCCGTCGCT 148
Query 1 ------------------------------------------------------ATGGGGGGCACCCTGGCATG 20
||||||||||||||||||||
Sbjct 149 TTTCCAGCATCGCAGAGGCAAAAGCGTGGCAGTGGGACCCAAAAGGTTGCTTGAATGGGGGGCACCCTGGCATG 222
Query 21 GACGCTGCTGTTGCCGCTGCTGCTGCGGGAGTCAGACAGCCTAGAACCGTCGTGCACCGTGTCCTCCGCGGATG 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACGCTGCTGTTGCCGCTGCTGCTGCGGGAGTCAGACAGCCTAGAACCGTCGTGCACCGTGTCCTCCGCGGATG 296
Query 95 TGGACTGGAACGCGGAGTTCAGTGCCACGTGCCTGAATTTCAGTGGCCTCAGCCTGAGCCTGCCTCACAACCAG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGACTGGAACGCGGAGTTCAGTGCCACGTGCCTGAATTTCAGTGGCCTCAGCCTGAGCCTGCCTCACAACCAG 370
Query 169 TCTCTGCGGGCCAGCAACGTGATTCTCCTTGACCTGTCTGGGAACGGCCTGCGAGAGCTTCCAGTGACCTTCTT 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCTGCGGGCCAGCAACGTGATTCTCCTTGACCTGTCTGGGAACGGCCTGCGAGAGCTTCCAGTGACCTTCTT 444
Query 243 TGCCCACCTGCAGAAGCTTGAGGTCCTGAACGTGCTACGCAACCCCTTGTCTCGTGTGGATGGGGCGCTGGCCG 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGCCCACCTGCAGAAGCTTGAGGTCCTGAACGTGCTACGCAACCCCTTGTCTCGTGTGGATGGGGCGCTGGCCG 518
Query 317 CCCGCTGTGACCTTGACCTGCAGGCCGACTGCAACTGTGCCCTGGAGTCCTGGCACGACATCCGCCGAGACAAC 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCGCTGTGACCTTGACCTGCAGGCCGACTGCAACTGTGCCCTGGAGTCCTGGCACGACATCCGCCGAGACAAC 592
Query 391 TGCTCTGGCCAGAAGCCTCTGCTCTGCTGGGACACAACCAGCTCCCAGCACAACCTCTCTGCCTTCCTGGAGGT 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTCTGGCCAGAAGCCTCTGCTCTGCTGGGACACAACCAGCTCCCAGCACAACCTCTCTGCCTTCCTGGAGGT 666
Query 465 CAGCTGCGCCCCTGGCCTGGCCTCTGCAACTATCGGGGCAGTGGTGGTCAGCGGGTGCCTGCTTCTTGGACTTG 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGCTGCGCCCCTGGCCTGGCCTCTGCAACTATCGGGGCAGTGGTGGTCAGCGGGTGCCTGCTTCTTGGACTTG 740
Query 539 CCATCGCTGGCCCTGTGCTGGCCTGGAGACTCTGGCGATGCCGAGTGGCCAGAAGCCGGGAGCTGAACAAACCC 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCATCGCTGGCCCTGTGCTGGCCTGGAGACTCTGGCGATGCCGAGTGGCCAGAAGCCGGGAGCTGAACAAACCC 814
Query 613 TGGGCTGCTCAGGATGGGCCCAAGCCCGGTTTAGGCTTGCAGCCACGGTACGGCAGCCGGAGCGCCCCCAAGCC 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGGCTGCTCAGGATGGGCCCAAGCCCGGTTTAGGCTTGCAGCCACGGTACGGCAGCCGGAGCGCCCCCAAGCC 888
Query 687 CCAAGTGGCCGTGCCATCCTGCCCCTCCACTCCCGACTATGAGAACATGTTTGTGGGCCAGCCAGCAGCCGAGC 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCAAGTGGCCGTGCCATCCTGCCCCTCCACTCCCGACTATGAGAACATGTTTGTGGGCCAGCCAGCAGCCGAGC 962
Query 761 ACCAGTGGGATGAACAAG-------------------------------------------------------- 778
||||||||||||||||||
Sbjct 963 ACCAGTGGGATGAACAAGGGTAAGTAAGCCACTGAGACACCTGCCAAAGTGGTGAATAATAAGGCTCCACACCC 1036
Query 779 -----------------------------------------------------GGGCTCACCCTTCAGAGGACA 799
|||||||||||||||||||||
Sbjct 1037 AGATGGCCGAGGTTCAAATCCCAGCTCTGCCGCTTGAAGGCTGTGGGATCTTAGGGCTCACCCTTCAGAGGACA 1110
Query 800 ATGACTTTTACATCAACTACAAGGACATCGACCTGGCTTCCCAGCCTGTCTACTGTAACCTGCAGTCACTGGGC 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGACTTTTACATCAACTACAAGGACATCGACCTGGCTTCCCAGCCTGTCTACTGTAACCTGCAGTCACTGGGC 1184
Query 874 CAGGCCTCAATGGATGAAGAGGAGTACGTGATCCCCGGGCAC-------------------------------- 915
||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGGCCCCAATGGATGAAGAGGAGTACGTGATCCCCGGGCACTGAGCCTAAGATGTCCTAACCTCCACCCAGAA 1258
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1259 CCCCTTCAGTCCCTGCTGGGTGACTCAGGGCGTCCTAACGCCTCCATGGCCTCAGTTTCCCCATCTGAAGAATG 1332
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1333 GGTACAGGAAAGGATTGTCCTTGAGGCCCCAGGAAGCTCTGCCGCCCCCTCCCTGTCCCTCATGCCGCTCCTCA 1406
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1407 GCTCCCTCAGCTCCTAGAGGGGGAAGAGGAGAGACCCCCAACAAGGGGACAGGACGGTCACTGTGCCAATCCTG 1480
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1481 TCATCACCCTCCTGTGGATGTACAGGCAGTGCTCAATAAATGCTTCGAGGCTGATGAGGCTGCTGGCTCAGGGT 1554
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1555 GCGTGGGTTCCTCAAGGTGGGGATTTCTGAGTTCTAAGACCAAGTCTCCATCTGAGACTCCCAAATTGCTCCCC 1628
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1629 ACCTCCCATCCCTGTTTTTTTTTGTTGTTGTTGTTTGTTTGTTTGTTTTTGAAACTGAGTGTCACTCTGTCACC 1702
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1703 CAGGCTGGAGTGCAATGCTGCGGTCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCT 1776
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1777 CAGCCTCCTGAGTAGCTGGGATTACAGCACCCGCCACCATGCCGAGCTAATTTTTGTATTTATAATAGAGATGG 1850
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1851 GGTTTCGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGCGATCTGCCCGCCTCGGCCTCCTGAAGT 1924
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1925 GCTGGGATTACAGGCGTGGCCACTGCGCCCAGGCACATTCCTCCCTTCTGCCCCTCTCAGGGCCCCTTCCCAGG 1998
Query 916 -------------------------------------------------------------------------- 915
Sbjct 1999 TCCCTGATCTCCAGGCTTGGCCTCCAGAGCAGCCCACACCAACCCCAAAATAAAAAAATGTATATATTCCTTTA 2072
Query 916 ------- 915
Sbjct 2073 GCTCTAA 2079
