Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09588
• Subject: NM_001363781.1
• Aligned Length: 1158
• Identities: 605
• Gaps: 552

Alignment

Query    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74

Query   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148

Query  149  GGGACACAGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  149  GGGACACAGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGG--------------  208

Query  223  TTTGAGAACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCA  296
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  297  GATCACCTGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACC  370
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  371  CCAATGTCACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTC  444
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  445  AGGCTGCATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGT  518
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  519  GTGCAATGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAA  592
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  593  AGGAGATTCTCAGAAACCCGATGGAGGCAATGTACCCACACATATTCTACTTCCACTTTAAAAACCTACTGAAA  666
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  667  GCCTGTGGTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTACAAAGCACCACTCAGCTGTCTTCCGGAA  740
                                                                                      
Sbjct  209  --------------------------------------------------------------------------  208

Query  741  GAGGGGCGTCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCT  814
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  209  --------------------AGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCT  262

Query  815  GTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  GTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGT  336

Query  889  GCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  GCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTA  410

Query  963  TTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCT  1036
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  411  CTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCT  484

Query 1037  ACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  ACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTA  558

Query 1111  CAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG  1158
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  CAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG  606