Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09588
- Subject:
- XR_001755170.2
- Aligned Length:
- 2445
- Identities:
- 1000
- Gaps:
- 1444
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAATCC 8
||||||||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 83 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 518
Query 157 GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA 592
Query 231 CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT 666
Query 305 GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC 740
Query 379 ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCA 814
Query 453 TAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATG 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATG 888
Query 527 AAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATT 962
Query 601 CTCAGAAACCCGATGGAGGCAATGTACCCACACATATTCTACTTCCACTTTAAAAACCTACTGAAAGCCTGTGG 674
||
Sbjct 963 CT------------------------------------------------------------------------ 964
Query 675 TCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTACAAAGCACCACTCAGCTGTCTTCCGGAAGAGGGGCG 748
Sbjct 965 -------------------------------------------------------------------------- 964
Query 749 TCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGAC 822
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 -----------CAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGAC 1027
Query 823 ATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGA 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 ATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGA 1101
Query 897 GGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTATTTCTGGG 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1102 GGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGG 1175
Query 971 ATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGAT 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 ATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGAT 1249
Query 1045 TTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAA 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 TTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAA 1323
Query 1119 CTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG---------------------------------- 1158
||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 CTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCT 1397
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1398 TCTAGCCTCCTGCTCATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGA 1471
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1472 GCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTT 1545
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1546 CTTGTAGAGGCTCTCCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCAT 1619
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1620 CTCCCCAGCATAACCAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTAG 1693
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1694 AGTGCAATGGCTGGATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCT 1767
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1768 GAGTAGCTGGGATTACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATT 1841
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1842 TTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATCT 1915
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1916 CTGTCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTCA 1989
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 1990 ATCTAGTCTGGCCCTGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAG 2063
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 2064 ACCAGCCTGGGCCACACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCAT 2137
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 2138 GCACCTGTAGTTTAAGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTA 2211
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 2212 AACTGAGATCGCGCCACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATAC 2285
Query 1159 --- 1158
Sbjct 2286 ACT 2288
