Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09677
• Subject: NM_178723.6
• Aligned Length: 1449
• Identities: 989
• Gaps: 345

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAACATGGCAACCTTCCTCCGGGGCTTTGAAGAAAAGGGGTTAAAGAACGACAGGCCTGGGGACCAGTTCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGGAGAAGAAGAAGATTCTCTTCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGCTCAGGCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGTCCATTATGACGGCAAATCCCATCGAAAGCGGGTCAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGGGCTCAGTGCCACTGCTGGCTGGCCCTTGCCCTTGCCCTGGGCCTGGCCCGAACACCAGCACAGGCAGCGC  296

Query    1  ----------------------------------------------ATGATGCATCCTTCACTGGATATCAAAC  28
                                                          ||||||||.|||||.|||||.|||||||
Sbjct  297  ATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCACCCTGATGATGCAGCCTTCGCTGGACATCAAAC  370

Query   29  CATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATGGATCCTGTG  102
            |.||.|||||||||||||||||||||||.|||||.||.||||||||||||||.||||||||||||||.||||||
Sbjct  371  CGTTCATGTCTTTTCCAGTGGACAGTAGCTCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATGGACCCTGTG  444

Query  103  CAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGT  176
            ||.|||||.||.||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.|||||.||
Sbjct  445  CAGAAAGCAGTCATTAACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGAAACAAGTTATTTCCTGTAACGT  518

Query  177  CTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCA  250
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTGTCAGCTTCGCTTTAACTCGGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCA  592

Query  251  AAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGC  324
            ||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGCTCTAGAGGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGC  666

Query  325  TCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAG  398
            |||||||..|||..|||||||.|||.||||||||||||||||||.|||||||||.|||||||||.|||||||||
Sbjct  667  TCCATCAGGCCAGGCACAGGCGACAGCTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGCCACCAGTTCCAG  740

Query  399  TCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCA  472
            ||||||.|||.||||.|||.|.|||||.|||.||||||||||||||||||||||||||||||.||||||...|.
Sbjct  741  TCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCG  814

Query  473  CTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTA  546
            ||||||||||||||||||||||.||.|||||.||..||||||.|||.|||||||||||||||||||||||||||
Sbjct  815  CTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCCAAAAAATTA  888

Query  547  CTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACA  620
            ||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||.||||||||||||||||||||
Sbjct  889  CTCTACTGCTCACTATGCAAGGTGGCTGTGAACTCCCTGTCACAGCTGGAGGCTCACAACACAGGATCTAAACA  962

Query  621  CAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGA  694
            |||||||||||||||.|||||||||||.||||||||||||||.||||||||.||||||||.||||||||||||.
Sbjct  963  CAAGACCATGGTTGAGGCTCGTAATGGAGCTGGTCCAATTAAGTCCTATCCAAGACCTGGGTCAAGATTAAAGG  1036

Query  695  TGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAAT  768
            |||||||.|||||||||||.|||||||||||||||||.|..|||||||||||.||||||||||||||.||.||.
Sbjct 1037  TGCAGAACGGCAGTAAGGGCTCAGGACTACAGAACAAAATGTTTCATTGTGAGATCTGTGATGTTCACGTGAAC  1110

Query  769  TCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCC  842
            |||||.|||||||||||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.||||||||
Sbjct 1111  TCAGAGATTCAACTCAAACAGCACATTTCAAGCCGAAGGCATAAAGACCGCGTGGCAGGAAAACCGCTGAAGCC  1184

Query  843  AAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATA  916
            .|||||||||||.||||||||.||.|||||||||||.||.||..||||.|||||.||||||||||||||||||.
Sbjct 1185  GAAATACAGCCCCTACAACAAGCTGCAGCGGAGCCCAAGCATCTTAGCTGCAAAGCTTGCATTCCAGAAAGATC  1258

Query  917  TGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCA  990
            |||||||||||.|||||||..|.||||||||.|||||.||   .|||||.||||||||||||||.|||||||||
Sbjct 1259  TGATGAAGCCTCTGGCCCCTACGTTCCTGTCTTCACCCCT---GGCGGCCGCAGCCGTGTCCTCTGCGCTGTCA  1329

Query  991  CTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGG  1064
            ||.|||||.|||||.||.|||||.||.|||||||||.|||||||.|||||.||.||.|||||||||||.||.||
Sbjct 1330  CTGCCACCTCGGCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGCTGAGGCCTGGCCACGG  1403

Query 1065  GCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC  1107
            |||||||||.|||||.||.|||||||||||||||||.||.|||
Sbjct 1404  GCCCATCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTTAC  1446