Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09677
Subject:
NR_148057.2
Aligned Length:
3257
Identities:
925
Gaps:
2318

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGTGTCAACGAGCCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTCGGCCAGGCCAGGGGGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGCGTGCGGCGGGGCCGGGCCGGGCCGGGCGCGCCCAGCGGGCTCCGGGCACACGCCCCTCACCTGGGCGAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCGGTGCGCAGGCGCTCAGCGCGGGGGCAGCGGCCGGGCGCTTAAGCCCGGCGCGGGCAAGAGTTGGACAGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCGCGCCGGGCCGAGCTGTCGCCCGCGCCACCTCCACCGCCGCCGCTGCTACCGCCACCGCCACCGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGCCCCACGCGCCCGCGGCCCGCGCGCCGAGATGTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TACATTTCAACTCCATCAAATATTAAATTGATGTTTATGGGCTAACCTGGAAACCGAAAAACAGTTTGTTTCAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TACAAGAATAAGAAAATATGTCCAAATTCCTGTCAGCTGACTTATAAAGGGACTTTTAGAACACAACCCAATGC  666

Query    1  ATGATGCA-TCCTT---CACTG--------------GAT---ATCA--AACCATTTATGTC---TTTTC-----  43
            ||||.|.| |||||   |.|||              |||   ||||  ||     ||||.|   |||||     
Sbjct  667  ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAA-----TATGGCAAATTTTCTACGG  735

Query   44  ------------CAGTGGA-----------------------CAGTAG------------------------TT  58
                        .||.|||                       ||||.|                        ||
Sbjct  736  GGCTTTGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTT  809

Query   59  CTGCTGTTG------------------------------------GGCT------CTTTC------CAAAT---  81
            ||.||..||                                    ||||      |.|||      |||||   
Sbjct  810  CTCCTTCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCC  883

Query   82  -----------TTTAA----------------------------------------------------------  86
                       .|.||                                                          
Sbjct  884  ACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGC  957

Query   87  --CACA-ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAAC  157
              |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  958  AGCACAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAAC  1031

Query  158  AAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGT  231
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct 1032  AAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGAT------------------------------  1075

Query  232  AAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGC  305
                                                                                      
Sbjct 1076  --------------------------------------------------------------------------  1075

Query  306  AAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGT  379
                                                                       |||||||||||||||
Sbjct 1076  -----------------------------------------------------------AAGATAAAGGGAAGT  1090

Query  380  TAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCC  453
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1091  TAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCACAACACCC  1164

Query  454  CTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGA  527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165  CTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGA  1238

Query  528  AGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCAC  601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239  AGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCAC  1312

Query  602  ACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGA  675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313  ACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGA  1386

Query  676  CCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAAT  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387  CCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAAT  1460

Query  750  CTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTG  823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1461  CTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTG  1534

Query  824  CAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAA  897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1535  CAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAA  1608

Query  898  CTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGC  971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1609  CTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGC  1682

Query  972  CGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTC  1045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1683  CGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTC  1756

Query 1046  TTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC------------  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 1757  TTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTACTAACGTCTGCAA  1830

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1831  ACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTG  1904

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1905  TTGCAGTACCCCCCATTCACCCACAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCAC  1978

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1979  TAGATTGACGAGGGCTTTTAGAGACTGCTCCTATAATTGAGGAATCAGCAGCATAGGCTTTATCTCCCTACTTC  2052

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2053  CTCCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGATATTTGATTTCTTGAGCATGTATTGGTCAGAAAGAA  2126

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2127  AAAGAAAGAAAACCATTCTCTATTTTTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACA  2200

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2201  GACTTGAAAACTAGGATCTTCCTCAGATGTCTGTAAATAACTCTGGTATCCAACTGGGTGTATTCTAGTGTGGA  2274

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2275  ACAAAAAACAGTGAACACAAGTGCTTACTTGTGGATACTATCTTACCAACGGATCACAAAGTTCTCTTTTTGGT  2348

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2349  GTACTGTTGTTGACAGGGATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTA  2422

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2423  TCTCTTGTCTGAATTAAACATTTTTAGTTGCTGTGTAAATGTTAGGAAGCAAAGTAGCTTTGAATTTTCTCTGT  2496

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2497  AAGAGAATAAAAGATAAAATAATGTATTTTCTTTATTTCACATTTTATTTGGAGATATTTAAATGAAATAGAAA  2570

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2571  GCCATATAACATAGCTATAATTACTACCTGTTTGCTATTTTTGTTTAACTTATTTTGTAGCTTCCTCACTGGTT  2644

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2645  TGTGTTGCTAAGCAAACGTATACAAACAGAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATT  2718

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2719  CTGCAAGAAGACAATGAATCCATGTATTTCTATATAAGTATCTTCTTCATTTTTAACCTGTTTTCATTTGTAAT  2792

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2793  GATGCTACATAATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGATAAAAAAATTTATAATTGAACAATTTG  2866

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2867  TCTTTCTGTTCGCTGAATATATTGCAGGTCATGCTCCCATGCCCCCCTTTCTAAGCCGATATCAACAAGACTGG  2940

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 2941  AATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATAT  3014

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 3015  CTGCAACCTGTAAATGGTAAAATGTCTGTGTATTTTTTTAAATGTACCTTTTCAATAAAAGTACAAAAAATAAA  3088

Query 1108  -  1107
             
Sbjct 3089  A  3089

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