Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09677
- Subject:
- XM_006499455.3
- Aligned Length:
- 1575
- Identities:
- 989
- Gaps:
- 471
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACATGGCAACCTTCCTCCGGGGCTTTGAAGAAAAGGGGTTAAAGAACGACAGGCCTGGGGACCAGTTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGGAGAAGAAGAAGATTCTCTTCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGCTCAGGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTCCATTATGACGGCAAATCCCATCGAAAGCGGGTCAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGGCTCAGTGCCACTGCTGGCTGGCCCTTGCCCTTGCCCTGGGCCTGGCCCGAACACCAGCACAGGCAGCGC 296
Query 1 ----------------------------------------------ATGATGCATCCTTCACTGGATATCAAAC 28
||||||||.|||||.|||||.|||||||
Sbjct 297 ATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCACCCTGATGATGCAGCCTTCGCTGGACATCAAAC 370
Query 29 CATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACA------------ 90
|.||.|||||||||||||||||||||||.|||||.||.||||||||||||||.|||||||||
Sbjct 371 CGTTCATGTCTTTTCCAGTGGACAGTAGCTCTGCCGTGGGGCTCTTTCCAAACTTTAACACACCATCTTTGTCC 444
Query 91 -------------------------------------------------------------------------- 90
Sbjct 445 GTGGACTTGTGCCTGTTGGCTCTCAGAGCCCCTACGCATACAGGACTGAGGAAGAGACCAGGCCATCTAAAGGA 518
Query 91 ----------------------------------------ATGGATCCTGTGCAAAAAGCGGTTATTAACCATA 124
|||||.||||||||.|||||.||.||||||||.|
Sbjct 519 GAAAAGAAGAGGCTTATTTGGGACCAATAAGTTCTGCCAGATGGACCCTGTGCAGAAAGCAGTCATTAACCACA 592
Query 125 CATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCA 198
||||||||||.|||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||.
Sbjct 593 CATTTGGAGTCTCCATTCCCCCGAAGAAGAAACAAGTTATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTCG 666
Query 199 GATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAA 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 667 GATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAACGAAAAA 740
Query 273 TAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCA 346
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||..|||||||.
Sbjct 741 TAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCAGGCCAGGCACAGGCG 814
Query 347 ACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGT 420
|||.||||||||||||||||||.|||||||||.|||||||||.|||||||||||||||.|||.||||.|||.|.
Sbjct 815 ACAGCTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGA 888
Query 421 GGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAA 494
|||||.|||.||||||||||||||||||||||||||||||.||||||...|.||||||||||||||||||||||
Sbjct 889 GGCTCCTTTCTCCTCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAA 962
Query 495 TGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAG 568
.||.|||||.||..||||||.|||.|||||||||||||||||||||||||||||.||.||.|||||||||||.|
Sbjct 963 CGGCGCTCCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCCAAAAAATTACTCTACTGCTCACTATGCAAGG 1036
Query 569 TGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGT 642
|||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037 TGGCTGTGAACTCCCTGTCACAGCTGGAGGCTCACAACACAGGATCTAAACACAAGACCATGGTTGAGGCTCGT 1110
Query 643 AATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTC 716
|||||.||||||||||||||.||||||||.||||||||.||||||||||||.|||||||.|||||||||||.||
Sbjct 1111 AATGGAGCTGGTCCAATTAAGTCCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGGCTC 1184
Query 717 AGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGC 790
|||||||||||||||.|..|||||||||||.||||||||||||||.||.||.|||||.||||||||||||||||
Sbjct 1185 AGGACTACAGAACAAAATGTTTCATTGTGAGATCTGTGATGTTCACGTGAACTCAGAGATTCAACTCAAACAGC 1258
Query 791 ACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAA 864
|||||||.|||||||||||||||||.||.||.|||||.|||||.||||||||.|||||||||||.||||||||.
Sbjct 1259 ACATTTCAAGCCGAAGGCATAAAGACCGCGTGGCAGGAAAACCGCTGAAGCCGAAATACAGCCCCTACAACAAG 1332
Query 865 CTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGC 938
||.|||||||||||.||.||..||||.|||||.||||||||||||||||||.|||||||||||.|||||||..|
Sbjct 1333 CTGCAGCGGAGCCCAAGCATCTTAGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAAGCCTCTGGCCCCTAC 1406
Query 939 CTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCT 1012
.||||||||.|||||.|| .|||||.||||||||||||||.|||||||||||.|||||.|||||.||.||||
Sbjct 1407 GTTCCTGTCTTCACCCCT---GGCGGCCGCAGCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCATCCGCCT 1477
Query 1013 CGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCC 1086
|.||.|||||||||.|||||||.|||||.||.||.|||||||||||.||.|||||||||||.|||||.||.|||
Sbjct 1478 CTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGCTGAGGCCTGGCCACGGGCCCATCCGGGCCACGCCCGCC 1551
Query 1087 TCCATCCTCTTTGCTCCGTAC 1107
||||||||||||||.||.|||
Sbjct 1552 TCCATCCTCTTTGCCCCTTAC 1572