Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09699
• Subject: XM_005271908.1
• Aligned Length: 1587
• Identities: 1240
• Gaps: 345

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCGCACTGACGACGGTTGTGGTAGCGGCTGCGGCCACCGCGGTAGCCGGGGCTGTGGCAGGGGCGGGCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCACCGGGACCGGCGTGGGAGCGACGCCAGCGCCTCAACAGAGTGATGGCTGTTTTAGTACTTCAGGTGGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCGTCCTTTTCATCTTCAGAACTGGAAGCAGAAAGTTAATCAGACTAAGAAAGCAGAATTTGTACGCACAGCA  222

Query    1  ---------------------------ATGGAAAAAGATAAACACAGTCATTTCTACAACCAAAAAAGTGACTT  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAAAATTTAAAAATCAAGTAATTAACATGGAAAAAGATAAACACAGTCATTTCTACAACCAAAAAAGTGACTT  296

Query   48  CAGAATTGAGCATAGTATGCTAGAAGAATTGGAAAATAAATTGATTCACAGCAGGAAAACAGAAAGAGCAAAAA  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGAATTGAGCATAGTATGCTAGAAGAATTGGAAAATAAATTGATTCACAGCAGGAAAACAGAAAGAGCAAAAA  370

Query  122  TCCAGCAACAATTGGCCAAAATACATAATAATGTAAAGAAACTTCAGCATCAATTAAAAGATGTGAAGCCTACA  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCAGCAACAATTGGCCAAAATACATAATAATGTAAAGAAACTTCAGCATCAATTAAAAGATGTGAAGCCTACA  444

Query  196  CCTGATTTTGTTGAGAAGCTCAGAGAAATGATGGAAGAAATTGAAAATGCAATTAACACTTTTAAAGAAGAGCA  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTGATTTTGTTGAGAAGCTCAGAGAAATGATGGAAGAAATTGAAAATGCAATTAACACTTTTAAAGAAGAGCA  518

Query  270  GAGGTTGATATATGAAGAGCTAATTAAAGAAGAGAAGACAACTAATAATGAGTTGAGTGCCATATCAAGAAAAA  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAGGTTGATATATGAAGAGCTAATTAAAGAAGAGAAGACAACTAATAATGAGTTGAGTGCCATATCAAGAAAAA  592

Query  344  TTGACACATGGGCTTTGGGTAATTCAGAAACAGAGAAAGCTTTCAGAGCAATCTCAAGCAAAGTTCCTGTAGAC  417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGACACATGGGCTTTGGGTAATTCAGAAACAGAGAAAGCTTTCAGAGCAATCTCAAGCAAAGTTCCTGTAGAC  666

Query  418  AAAGTAACACCAAGTACTCTTCCAGAAGAGGTACTAGATTTTGAAAAATTCCTTCAGCAAACAGGAGGGCGACA  491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAAGTAACACCAAGTACTCTTCCAGAAGAGGTACTAGATTTTGAAAAATTCCTTCAGCAAACAGGAGGGCGACA  740

Query  492  AGGTGCCTGGGATGATTATGATCACCAGAACTTTGTAAAGGTGAGAAACAAACATAAAGGGAAGCCAACATTTA  565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGTGCCTGGGATGATTATGATCACCAGAACTTTGTAAAGGTGAGAAACAAACATAAAGGGAAGCCAACATTTA  814

Query  566  TGGAAGAAGTTCTAGAACACCTTCCTGGAAAAACACAAGATGAAGTTCAACAGCATGAAAAATGGTATCAAAAG  639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGAAGAAGTTCTAGAACACCTTCCTGGAAAAACACAAGATGAAGTTCAACAGCATGAAAAATGGTATCAAAAG  888

Query  640  TTTCTGGCTCTAGAAGAAAGAAAAAAAGAGTCAATTCAGATTTGGAAAACTAAAAAGCAGCAAAAAAGGGAGGA  713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTTCTGGCTCTAGAAGAAAGAAAAAAAGAGTCAATTCAGATTTGGAAAACTAAAAAGCAGCAAAAAAGGGAGGA  962

Query  714  AATTTTCAAGTTAAAGGAAAAGGCAGACAACACACCTGTGCTTTTTCATAATAAACAAGAGGATAATCAAAAGC  787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATTTTCAAGTTAAAGGAAAAGGCAGACAACACACCTGTGCTTTTTCATAATAAACAAGAGGATAATCAAAAGC  1036

Query  788  AAAAAGAGGAACAAAGAAAGAAACAGAAATTGGCAGTTGAAGCTTGGAAGAAACAGAAAAGTATAGAAATGTCA  861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAAAAGAGGAACAAAGAAAGAAACAGAAATTGGCAGTTGAAGCTTGGAAGAAACAGAAAAGTATAGAAATGTCA  1110

Query  862  ATGAAATGTGCTTCCCAGTTAAAAGAAGAAGAAGAGAAAGAGAAAAAACATCAGAAAGAACGCCAGCGCCAGTT  935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATGAAATGTGCTTCCCAGTTAAAAGAAGAAGAAGAGAAAGAGAAAAAACATCAGAAAGAACGCCAGCGCCAGTT  1184

Query  936  TAAGTTAAAATTACTACTAGAAAGTTATACCCAGCAGAAGAAAGAACAGGAAGAATTTTTGAGGCTTGAAAAGG  1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TAAGTTAAAATTACTACTAGAAAGTTATACCCAGCAGAAGAAAGAACAGGAAGAATTTTTGAGGCTTGAAAAGG  1258

Query 1010  AGATAAGGGAAAATGCAGAAAAGGCAGAAAAAAGGAAAAATGCTGCTGATGGAATTTCCAGATTTCAAGAAAGA  1083
            |||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1259  AGATAAGGGAAAAGGCAGAAAAGGCAGAAAAAAGGAAAAATGCTGCTGATGAAATTTCCAGATTTCAAGAAAGA  1332

Query 1084  GATTTACATAAACTTGAACTGAAAATTCTAGATAGACAGGCAAAGGAAGATGAAAAGTCACAAAAACAAAGAAG  1157
                                                                                      
Sbjct 1333  --------------------------------------------------------------------------  1332

Query 1158  ACTGGCAAAATTAAAAGAAAAGGTTGAAAACAATGTTAGTAGAGATCCCTCTAGGCTTTACAAACCCACCAAAG  1231
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ----------------------GTTGAAAACAATGTTAGTAGAGATCCCTCTAGGCTTTACAAACCCACCAAAG  1384

Query 1232  GTTGGGAAGAACGAACCAAAAAGATAGGACCAACAGGCTCTGGGCCACTTCTACATATCCCACATAGGGCTATT  1305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385  GTTGGGAAGAACGAACCAAAAAGATAGGACCAACAGGCTCTGGGCCACTTCTACATATCCCACATAGGGCTATT  1458

Query 1306  CCAACCTGGAGACAAGGAATACAGAGAAGAGTA  1338
            |||||||||||||||||||||||||||||||||
Sbjct 1459  CCAACCTGGAGACAAGGAATACAGAGAAGAGTA  1491