Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09706
- Subject:
- XR_001743174.2
- Aligned Length:
- 1897
- Identities:
- 658
- Gaps:
- 1236
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATTGGGTACCATTGTATGTCCCTGGCTGTCTGTTAGTAAAGCTTAGAGATGCCTGTGGAAAAAAAGTAGGAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTGAAGAAATTTGAGAAATGGGATGCTAGGAAATAGGTTTAAATCAGGTCTTATTTTTAAAGTGTATTTACA 148
Query 1 ----------ATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAGCTAG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGAGACAGCAATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAGCTAG 222
Query 65 TTCATAGATTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTG 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCATAGATTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTG 296
Query 139 GTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTTAATTAAAAAATACAAGCAGAACACTCAAGGACTGAA 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTTAATTAAAAAATACAAGCAGAACACTCAAGGACTGAA 370
Query 213 GTCCCCAGAAAACCCCAAAAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGGGATAAAGAGT 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 371 GTCCCCAGAAAACCCCAAAAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGGGATGAAGAGT 444
Query 287 CCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATT 518
Query 361 GACCAAAGAGTATTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAA 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACCAAAGAGTATTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAA 592
Query 435 GTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACAGCA 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACAGCA 666
Query 509 TGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACC 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACC 740
Query 583 CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTC-- 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTT 814
Query 655 --GCTGGAGTA--------------------------------------------------------------- 663
..|||| |
Sbjct 815 TTTATGGA--AACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAGCAAGTGAT 886
Query 664 -------------------------------------------------------------------------- 663
Sbjct 887 TAGAAATAAGTGTAAATTTGGACACCGAAGAGGCCAGACAAGGAAATCTCTTGCTGATATAAGATTTGATGAAA 960
Query 664 -------------------------------------------------------------------------- 663
Sbjct 961 TTAAACTTGTCCAGATAAAAGAAGAAGCTGTTTGTTTTGATTCTGAGCTAGATGAACATATTAAGTGGTTCCAG 1034
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1035 CAAGAATACGTGAAAACAGAAAAGGACTGGAGAGAAATTGACAAGAGAATGAGCCAAACTTTGGAAATAAGAAG 1108
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1109 AAAGATGATTGGCAGCCGAACACCTCTGAAGGACATTCTTAAACTGTTTCCTTTCTTGAAGTGCCCTTATCAGA 1182
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1183 TGTTCAGAGAATTCCAACTTCTTACAAGAACAGATATTTATAAGAAAACAAGGCACATTTTGGAATCCTATTCA 1256
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1257 GAAAATATACTGACTTCTTTTTCAGTGGTGGACAATCCAATCAATATTGTATTGCAAGAAAAAATGAAACATTA 1330
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1331 CACAGATGAAGACATGTTGAAATACATGAAGATGACAGCCACATGTTTACTCCTCCCAGATGTTTTTGGGGATG 1404
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1405 ATCCCAGCCTTTTTGTCATCATGAATGAACAGGTGCAAGTGTCCACACCTGTGTTGGAAGTTAAAAACCCTTTC 1478
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1479 AACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGACGACTGTGTTACAGC 1552
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1553 CTTGGCTGCGCTAGTAGCTGCCTTTCATGTATTTAGGATTGAGTGTCCAAGAAGACTGTCCCAAACTTTCAACT 1626
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1627 TCCTAGAAACGCTGATTTTCGATATGCACAGTCCTTATTTTCCTTCTTTGAAAGAAAAGGAAAACGAAGTAGGA 1700
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1701 TTTCAGCACCCACTCACTTAATAGCATGCCAAATATTGTACTGGAATTTACCTCTGGGAAAACTGAAGCTTCAT 1774
Query 664 -------------------------------------------------------------------------- 663
Sbjct 1775 AAGAAATTGTTTTGATTTAGGGTTGTGGTAGAGGGGATCTGCCTTGCCCCAGGAGATCTGGTTGTCTTTAATCG 1848
Query 664 ----------------------------------------------- 663
Sbjct 1849 CTTGTTGAGAATAAGGGCTGCGGCATTTTTGAGGTCTCCTCATTGCT 1895
