Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09794
- Subject:
- NR_104293.2
- Aligned Length:
- 3752
- Identities:
- 1719
- Gaps:
- 2024
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGGGCGCCGGAACTGGTCCGGCCCGACTCACGACCCCGCGGGACCCGGCCGGAACCCGGCCCGACCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGCGCGGCGGAGGACGAGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGGCCGCGGCCGTCTCGTAGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCACCGGCCTTCCGGGTTCCAGCGCCAGGCCTGGTGCCTGCCCCAGGAGGATGAGCATTTGCATTGCCTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTATCGTGCCCTTCCACCTGCTGAAGCAGCTGTGCCTGCCGCTCTTGTGAACTGCGAACTTCCCCTTACCTC 296
Query 1 ------------------------------------------ATGCCGCCCCATGTGGTGCTCACCTTCCGGCG 32
||||.|||||||||||||||||||||||||||
Sbjct 297 CTCTCTCTGGCTCGGGAGCTGGCTCGGCCGCCTGTCAGTGCAATGCTGCCCCATGTGGTGCTCACCTTCCGGCG 370
Query 33 CCTGGGCTGCGCCTTGGCCTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACACAGCCC 106
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTGGGCTGCGCCTTGGCGTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACACAGCCC 444
Query 107 CAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCCTGGTT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCCTGGTT 518
Query 181 GACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT 592
Query 255 CTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGTGCTAACGACGCCTCCTACGTCG 328
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 593 CTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGCGCTAACGATGCCTCCTACGTCG 666
Query 329 TGGCCCAGTGGGCCTCATGGATGAGCGGCGGTGTGGCAGTACCCCTCTACAGGAAGCATCCCGCGGCCCAGCTG 402
|||||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 667 TGGCCCAGTGGGCGTCATGGATGAGTGGCGGTGTGGCAGTCCCCCTCTACAGGAAGCATCCCGCGGCCCAGCTG 740
Query 403 GAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGTCAGCCAGGAGTACCTGGAGCTCCTGAGCCCGGT 476
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 741 GAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCTCCTGAGCCCGGT 814
Query 477 GGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCAG 888
Query 551 AGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGGGGAGG 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGGGGAGG 962
Query 625 CCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC 1036
Query 699 CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTCCTC 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTCCTC 1110
Query 773 TCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAAGTTCT 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAAGTTCT 1184
Query 847 GAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGACAGGCA 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGACAGGCA 1258
Query 921 TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTCAGGCT 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTCAGGCT 1332
Query 995 CAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGTATGGC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGTATGGC 1406
Query 1069 ATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCATGCGCCTGCCAGGTTCCGTGGGGACCCC 1142
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1407 ATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGCCAGGTTCCGTGGGGACCCC 1480
Query 1143 ACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCACGCAG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCACGCAG 1554
Query 1217 AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGGGACCC 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGGGACCC 1628
Query 1291 TCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGA- 1363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGAC 1702
Query 1364 ----------------------------------------------------CAGGGGACACCGTGGTGTTTAA 1385
||||||||||||||||||||||
Sbjct 1703 AGGGGACACCGTGGTGTTTAAGGATGGCCAGTTAACCAGAGCCCCTTTTCCTCAGGGGACACCGTGGTGTTTAA 1776
Query 1386 GGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCC 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCC 1850
Query 1460 TGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGATTGGAGTTCCGGATATGACA 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTGATTGGAGTTCCGGATATGACA 1924
Query 1534 TGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTG 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTG 1998
Query 1608 GGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGA 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGCCAGAAATGTCCTGGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGA 2072
Query 1682 TGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCA--------------------------- 1728
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGGCAAGATTGACAAGAAGGCGCTCATCAGGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTC 2146
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2147 TGGTGGGGAGCAGCAGACGTCCCCTTCACACCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTTAAAC 2220
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2221 CTGAACCCCCCAAATCAGGTCACGTAGAATCAAGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCT 2294
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2295 CGGGCCAGTTGTTGCAGCTCAAGGAGACCGTCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTG 2368
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2369 CAGCGCGGTGCAGCCAGCCCCTGGCCCCACGTGCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTTGCCAGG 2442
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2443 CTCTCCAGGGCAGGTCCCAGAGGTTTCCCACAAAAAACAAAGACTCCACTGGAGGAAACAAGCCCCTGTCCCAC 2516
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2517 GCCGTCTGCACGTGCCTGTGCCTCACCCAGAGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGGCAGCCACCC 2590
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2591 AGGGGGCCCTCCTGGGAGGAGCTGAGGGTTCACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCAT 2664
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2665 TTCCTGGTGCTGCTCTTGGAGGAGAGCAGCTCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTC 2738
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2739 CATCAGCATGTGTCACAGAAAGTGCGTGGACGGATGGCCCCGGAGCTGCTCTGCCGTGACCCTGCCTCACCCCC 2812
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2813 CAGCGCAGGGACTTTCCAGGTCATCTCCACACCAGCCCCTCAGCCGGTGAACCCTCTCTCCCATCACCGTCTCC 2886
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2887 ACCCAGACCCCCACCTGCCCCATGGCCCCCATTTCATGTCTGTGGCTCACCAGCTTTTCCCCAGACCCAGCTCC 2960
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2961 GGAGCCCACAGGCGTGGCCGATGCAGAAACCTCAGGAAGGTGTGTTGTGAATGTTGGGTGCACCCACGTTGCAT 3034
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3035 TTACTTAGCGGGGCCAATTCAGATGCACAGGGGCCACATGCAGAATCCAGAAGTTTCTGGACAATTTTCAGAAG 3108
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3109 AATAGGCTGCCTCCTCCCCACAGCCTGGGGGAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCC 3182
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3183 AGAACATTCTGCCCCCGGAATGCACGTCTGAAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCC 3256
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3257 ATCTCAGGCTCACGTGCCTCTGACAGGAGACCAGCCCCATCTCAGGCTCACATGCCTCGCGGACAGTTGGACGT 3330
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3331 GGCCTGGGGCCCCTGCTCACTTGAGCATGTCGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCC 3404
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3405 TGTTTTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCACCCGAACTCCTGCCTCACGGTGTGGCCTT 3478
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3479 GTGCATCCCCATGGCCTGACCCCGGGAACAGTCAGAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCA 3552
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3553 AGGGAACGGCAGTCAGAGACTACAGTCCAGACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCT 3626
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3627 GTTGGGAAAAGGTCAAATTTAACATAGCAAAATTTTTACTTAATTCCACTAATTTTACATTTGCATCTCTCTCC 3700
Query 1729 ---------------------------------------------------- 1728
Sbjct 3701 TTTAATCCTGAAACTTTTGATTCCTAAAAAGCTTACATAATCATTTGCTTTA 3752
