Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09794
- Subject:
- NR_147928.2
- Aligned Length:
- 3796
- Identities:
- 1719
- Gaps:
- 2068
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGGGCGCCGGAACTGGTCCGGCCCGACTCACGACCCCGCGGGACCCGGCCGGAACCCGGCCCGACCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGCGCGGCGGAGGACGAGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGGCCGCGGCCGTCTCGTAGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCACCGGCCTTCCGGGTTCCAGCGCCAGGCCTGGTGCCTGCCCCAGGAGGATGAGCATTTGCATTGCCTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTATCGTGCCCTTCCACCTGCTGAAGCAGCTGTGCCTGCCGCTCTTGTGAACTGCGAACTTCCCCTTACCTC 296
Query 1 ------------------------------------------ATGCCGCCCCATGTGGTGCTCACCTTCCGGCG 32
||||.|||||||||||||||||||||||||||
Sbjct 297 CTCTCTCTGGCTCGGGAGCTGGCTCGGCCGCCTGTCAGTGCAATGCTGCCCCATGTGGTGCTCACCTTCCGGCG 370
Query 33 CCTGGGCTGCGCCTTGGCCTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACACAGCCC 106
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTGGGCTGCGCCTTGGCGTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACACAGCCC 444
Query 107 CAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCCTGGTT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCCTGGTT 518
Query 181 GACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGCAGGCT 592
Query 255 CTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGTGCTAACGACGCCTCCTACGTCG 328
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 593 CTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGCGCTAACGATGCCTCCTACGTCG 666
Query 329 TGGCCCAGTGGGCCTCATGGATGAGCGGCGGTGTGGCAGTACCCCTCTACAGGAAGCATCCCGCGGCCCAGCTG 402
|||||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 667 TGGCCCAGTGGGCGTCATGGATGAGTGGCGGTGTGGCAGTCCCCCTCTACAGGAAGCATCCCGCGGCCCAGCTG 740
Query 403 GAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGTCAGCCAGGAGTACCTGGAGCTCCTGAGCCCGGT 476
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 741 GAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCTCCTGAGCCCGGT 814
Query 477 GGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACCGGCAG 888
Query 551 AGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGGGGAGG 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGGGGAGG 962
Query 625 CCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCATGGAC 1036
Query 699 CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTCCTC 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTGTCCTC 1110
Query 773 TCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAAGTTCT 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAAGTTCT 1184
Query 847 GAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGACAGGCA 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGACAGGCA 1258
Query 921 TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTCAGGCT 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTCAGGCT 1332
Query 995 CAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGTATGGC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGTATGGC 1406
Query 1069 ATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCATGCGCCTGC------------------- 1123
|||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1407 ATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCGTGCGCCTGCCAGTAGGATGTGCTGGTTT 1480
Query 1124 -------------------------------------------------------------------------- 1123
Sbjct 1481 TGTCCAGTGCCACCGGCCACAGTCACCACGTAATATGGACGGAATGAGCAAAGCCCGGCTCGCTGAGGCTGCAG 1554
Query 1124 ----CAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGC 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTGCAGGTTCCGTGGGGACCCCACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGC 1628
Query 1194 CTGCTCCTACACCATCCACGCAGAGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGG 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTGCTCCTACACCATCCACGCAGAGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGG 1702
Query 1268 GGGAGCTGCTGGTGAGGGGACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTC 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGGAGCTGCTGGTGAGGGGACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTC 1776
Query 1342 ACCCTGGATGGCTGGTTTAAGACAGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGAC 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ACCCTGGATGGCTGGTTTAAGACAGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGAC 1850
Query 1416 CTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACC 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTCAGTGGACATCATCAAGACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACC 1924
Query 1490 CCAGCATCACAGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACC 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAGCATCACAGATGTGGCTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACC 1998
Query 1564 CTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGT 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTCCGAGAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAATGTCCTGGCCCCGTACGCGGT 2072
Query 1638 GCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCA 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGGCGCTCATCA 2146
Query 1712 GGCACTTCCACCCCTCA--------------------------------------------------------- 1728
|||||||||||||||||
Sbjct 2147 GGCACTTCCACCCCTCATGACCCGGCAGACTGGGACTGCGGGTCTGGTGGGGAGCAGCAGACGTCCCCTTCACA 2220
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2221 CCGAGAACCACGGGGGCCCGTCCAAGACCTGGCCTCCCTTAAACCTGAACCCCCCAAATCAGGTCACGTAGAAT 2294
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2295 CAAGAACTGTTTGGGATGAAATCACCATGTGGGGTCCCCAGCCTCGGGCCAGTTGTTGCAGCTCAAGGAGACCG 2368
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2369 TCCCTGGTGTCACCTCTGCCTGGTCACCGCCGACCTCATCTGTGCAGCGCGGTGCAGCCAGCCCCTGGCCCCAC 2442
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2443 GTGCTGAGGCACCTCCCGCCCCACAGTGCCCTGCAGTTGCCAGGCTCTCCAGGGCAGGTCCCAGAGGTTTCCCA 2516
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2517 CAAAAAACAAAGACTCCACTGGAGGAAACAAGCCCCTGTCCCACGCCGTCTGCACGTGCCTGTGCCTCACCCAG 2590
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2591 AGCCAGTGTCTCCCGGCCCACATAGGAGGTCTGGGCAGCCACCCAGGGGGCCCTCCTGGGAGGAGCTGAGGGTT 2664
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2665 CACAAGCCTCCCAGAACCAGCCCTGTCCCATGGGTTCCGTGCATTTCCTGGTGCTGCTCTTGGAGGAGAGCAGC 2738
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2739 TCCCACTGTGGGGACACCTGCCACCCTGCACACTACTGTGTGTCCATCAGCATGTGTCACAGAAAGTGCGTGGA 2812
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2813 CGGATGGCCCCGGAGCTGCTCTGCCGTGACCCTGCCTCACCCCCCAGCGCAGGGACTTTCCAGGTCATCTCCAC 2886
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2887 ACCAGCCCCTCAGCCGGTGAACCCTCTCTCCCATCACCGTCTCCACCCAGACCCCCACCTGCCCCATGGCCCCC 2960
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2961 ATTTCATGTCTGTGGCTCACCAGCTTTTCCCCAGACCCAGCTCCGGAGCCCACAGGCGTGGCCGATGCAGAAAC 3034
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3035 CTCAGGAAGGTGTGTTGTGAATGTTGGGTGCACCCACGTTGCATTTACTTAGCGGGGCCAATTCAGATGCACAG 3108
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3109 GGGCCACATGCAGAATCCAGAAGTTTCTGGACAATTTTCAGAAGAATAGGCTGCCTCCTCCCCACAGCCTGGGG 3182
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3183 GAAGTAACAGTCATCGCCCAGCAGTGTCTGGCCTGAACTTACCCAGAACATTCTGCCCCCGGAATGCACGTCTG 3256
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3257 AAAGAGTGGCCAGAAACGAGTGTGCCGGGCAGGAGGCCAGCCCCATCTCAGGCTCACGTGCCTCTGACAGGAGA 3330
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3331 CCAGCCCCATCTCAGGCTCACATGCCTCGCGGACAGTTGGACGTGGCCTGGGGCCCCTGCTCACTTGAGCATGT 3404
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3405 CGCCCACCAAGCTTGTCTGAGGCCACAGAGCAGCGTCCCAGCCCTGTTTTCCAGGACTGGTGGGTGCCCCAGTC 3478
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3479 CACGGCCCTGCCCCACCCGAACTCCTGCCTCACGGTGTGGCCTTGTGCATCCCCATGGCCTGACCCCGGGAACA 3552
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3553 GTCAGAGGAAGGGGTCCCGCCCTCCCGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAG 3626
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3627 ACGTTTGTGTCTAGGCCTTGCTGGTAGCTAAGGAAATGCCTTCTGTTGGGAAAAGGTCAAATTTAACATAGCAA 3700
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 3701 AATTTTTACTTAATTCCACTAATTTTACATTTGCATCTCTCTCCTTTAATCCTGAAACTTTTGATTCCTAAAAA 3774
Query 1729 ---------------------- 1728
Sbjct 3775 GCTTACATAATCATTTGCTTTA 3796
