Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09804
Subject:
XR_001737032.2
Aligned Length:
2656
Identities:
1672
Gaps:
984

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AACAGGTCAGGGCTAGGCTGGGGCCGGGTTCGCGGTGCTCGCTGAGGCGGCGGTGGCTACGGCTGGAGGAGCCG  74

Query    1  ------------------------------------------------------------------ATGGCGAC  8
                                                                              ||||||||
Sbjct   75  GGCCGAGGCCGCGGCGGAGGCCGCGGCTGGTACTGGGAGGGTGGCAGGGAGGGACGGGGAAGGAAGATGGCGAC  148

Query    9  GTCGGGGGCGAACGGGCCTGGTTCGGCCACGGCCTCGGCTTCCAATCCGCGCAAATTTAGTGAGAAGATTGCGC  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTCGGGGGCGAACGGGCCTGGTTCGGCCACGGCCTCGGCTTCCAATCCGCGCAAATTTAGTGAGAAGATTGCGC  222

Query   83  TGCAGAAGCAGCGTCAGGCCGAGGAGACGGCGGCCTTCGAGGAGGTGATGATGGACATCGGCTCCACCCGGTTA  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGCAGAAGCAGCGTCAGGCCGAGGAGACGGCGGCCTTCGAGGAGGTGATGATGGACATCGGCTCCACCCGGTTA  296

Query  157  CAGGCCCAAAAACTGCGACTGGCATACACAAGGAGCTCTCATTATGGTGGGTCTCTGCCCAATGTTAACCAGAT  230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGCCCAAAAACTGCGACTGGCATACACAAGGAGCTCTCATTATGGTGGGTCTCTGCCCAATGTTAACCAGAT  370

Query  231  TGGCTCTGGCCTGGCCGAGTTCCAGAGCCCCCTCCACTCACCTTTGGATTCATCTCGGAGCACTCGGCACCATG  304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGCTCTGGCCTGGCCGAGTTCCAGAGCCCCCTCCACTCACCTTTGGATTCATCTCGGAGCACTCGGCACCATG  444

Query  305  GGCTGGTGGAACGGGTGCAGCGAGATCCTCGAAGAATGGTGTCCCCACTTCGCCGATACACCCGCCACATTGAC  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCTGGTGGAACGGGTGCAGCGAGATCCTCGAAGAATGGTGTCCCCACTTCGCCGATACACCCGCCACATTGAC  518

Query  379  AGCTCTCCCTATAGTCCTGCCTACTTATCTCCTCCCCCAGAGTCTAGCTGGCGAAGGACGATGGCCTGGGGCAA  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGCTCTCCCTATAGTCCTGCCTACTTATCTCCTCCCCCAGAGTCTAGCTGGCGAAGGACGATGGCCTGGGGCAA  592

Query  453  TTTCCCTGCAGAGAAGGGGCAGTTGTTTCGACTACCATCTGCACTTAACAGGACAAGCTCTGACTCTGCCCTTC  526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTTCCCTGCAGAGAAGGGGCAGTTGTTTCGACTACCATCTGCACTTAACAGGACAAGCTCTGACTCTGCCCTTC  666

Query  527  ATACAAGTGTGATGAACCCCAGTCCCCAGGATACCTACCCAGGCCCCACACCTCCCAGCATCCTGCCCAGCCGA  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATACAAGTGTGATGAACCCCAGTCCCCAGGATACCTACCCAGGCCCCACACCTCCCAGCATCCTGCCCAGCCGA  740

Query  601  CGTGGGGGTATTCTGGATGGTGAAATGGACCCCAAAGTACCTGCTATTGAGGAGAACTTGCTAGATGACAAGCA  674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CGTGGGGGTATTCTGGATGGTGAAATGGACCCCAAAGTACCTGCTATTGAGGAGAACTTGCTAGATGACAAGCA  814

Query  675  TTTGCTGAAGCCATGGGATGCTAAGAAGCTATCCTCATCCTCTTCCCGACCTCGGTCCTGTGAAGTCCCTGGAA  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTTGCTGAAGCCATGGGATGCTAAGAAGCTATCCTCATCCTCTTCCCGACCTCGGTCCTGTGAAGTCCCTGGAA  888

Query  749  TTAACATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCCCACCTGCCATGAACACGGGGGGCTCC  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTAACATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCCCACCTGCCATGAACACGGGGGGCTCC  962

Query  823  CTACCTGACCTCACCAACCTGCACTTTCCCCCACCACTGCCCACCCCCCTGGACCCTGAAGAGACAGCCTACCC  896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTACCTGACCTCACCAACCTGCACTTTCCCCCACCACTGCCCACCCCCCTGGACCCTGAAGAGACAGCCTACCC  1036

Query  897  TAGCCTGAGTGGGGGCAACAGTACCTCCAATTTGACCCACACCATGACTCACCTGGGCATCAGCAGGGGCATGG  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TAGCCTGAGTGGGGGCAACAGTACCTCCAATTTGACCCACACCATGACTCACCTGGGCATCAGCAGGGGCATGG  1110

Query  971  GCCTGGGCCCAGGCTATGATGCACCAGGACTTCATTCACCTCTCAGCCACCCATCCCTGCAGTCCTCCCTAAGC  1044
            ||||||||||||||||||||||||                                                  
Sbjct 1111  GCCTGGGCCCAGGCTATGATGCAC--------------------------------------------------  1134

Query 1045  AATCCCAACCTCCAGGCTTCCCTGAGCAGTCCTCAGCCCCAGCTTCAGGGCTCCCACAGCCACCCCTCTCTGCC  1118
                                                                                      
Sbjct 1135  --------------------------------------------------------------------------  1134

Query 1119  TGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTTT  1192
                                                                                      
Sbjct 1135  --------------------------------------------------------------------------  1134

Query 1193  CCTCCTCCTCTTCCTCCTCCTCCACTTCATCTCCTGTTTTGGGCGCCCCCTCTTACCCTGCTTCTACCCCTGGG  1266
                                                                                      
Sbjct 1135  --------------------------------------------------------------------------  1134

Query 1267  GCCTCCCCCCACCACCGCCGTGTGCCCCTCAGCCCCCTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGGTC  1340
                                                                                      
Sbjct 1135  --------------------------------------------------------------------------  1134

Query 1341  CCAACAGCAGCTGCCCAAACAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCC  1414
                                                                         |||||||||||||
Sbjct 1135  -------------------------------------------------------------CAGGGCGTCCCCC  1147

Query 1415  TGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT  1488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148  TGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT  1221

Query 1489  ACCCAGCCCCACACCCCAAAGTCTCTACAGCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCAGTCCTCAGG  1562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222  ACCCAGCCCCACACCCCAAAGTCTCTACAGCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCAGTCCTCAGG  1295

Query 1563  TGGGCAGCCCCCAGGCAGGCAGTCTCATTATGGGACACCGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGT  1636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296  TGGGCAGCCCCCAGGCAGGCAGTCTCATTATGGGACACCGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGT  1369

Query 1637  CTTACCACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGGAGCAGTTCAGCATGGAGAGCCCATCAGCCAGC  1710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370  CTTACCACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGGAGCAGTTCAGCATGGAGAGCCCATCAGCCAGC  1443

Query 1711  CTGGTGCTGGATCCCCCTGGCTTTTCTGAAGGGCCTGGATTTTTAGGGGGTGAGGGGCCAATGGGTGGCCCCCA  1784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444  CTGGTGCTGGATCCCCCTGGCTTTTCTGAAGGGCCTGGATTTTTAGGGGGTGAGGGGCCAATGGGTGGCCCCCA  1517

Query 1785  GGATCCCCACACCTTCAACCACCAGAACTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAACATCATCCTCA  1858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1518  GGATCCCCACACCTTCAACCACCAGAACTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAACATCATCCTCA  1591

Query 1859  CAGGGGACTCCTCTCCAGGTTTCTCTAAGGAGATTGCAGCAGCCCTGGCCGGAGTGCCTGGCTTTGAGGTGTCA  1932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592  CAGGGGACTCCTCTCCAGGTTTCTCTAAGGAGATTGCAGCAGCCCTGGCCGGAGTGCCTGGCTTTGAGGTGTCA  1665

Query 1933  GCAGCTGGATTGGAGCTAGGGCTTGGGCTAGAAGATGAGCTGCGCATGGAGCCACTGGGCCTGGAAGGGCTAAA  2006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1666  GCAGCTGGATTGGAGCTAGGGCTTGGGCTAGAAGATGAGCTGCGCATGGAGCCACTGGGCCTGGAAGGGCTAAA  1739

Query 2007  CATGCTGAGTGACCCCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAA-  2079
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1740  CATGCTGAGTGACCCCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAAT  1813

Query 2080  --------------------------------------------------------------------------  2079
                                                                                      
Sbjct 1814  GAGGGCACCTCATCACCATCCCTCTTCTTGGCCCCATCCCCCACCACCATTCCTTTCCTCCCTTCCCCCTGGCA  1887

Query 2080  --------------------------------------------------------------------------  2079
                                                                                      
Sbjct 1888  GGTAGAGACTCTACTCTCTGTCCCCAGATCCTCTTTCTAGCATGAATGAAGGATGCCAAGAATGAGAAAAAGCA  1961

Query 2080  --------------------------------------------------------------------------  2079
                                                                                      
Sbjct 1962  AGGGGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAAGGGAGGGCCTAAAGC  2035

Query 2080  --------------------------------------------------------------------------  2079
                                                                                      
Sbjct 2036  ACTTGTAACTTTGAACCGTCTGTCTGGAGGTCAGAGCCTGTTGGAAAGCAGGGGTAGAGGGGAGCCCTGGAAGC  2109

Query 2080  --------------------------------------------------------------------------  2079
                                                                                      
Sbjct 2110  AGGGCTTTTCCGGATGCCTAGGGGTGGGCAGTGCCAGCCCCTCCTCACCACTCTTCCCCTTGCAGTGGAGGAGA  2183

Query 2080  ------------------------------------------------------------------  2079
                                                                              
Sbjct 2184  GAGCCAGAGTGGATACTATTTTTTATTAAATATATTATTATATGTTAATAAAAAAATCATATCAAA  2249

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