Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09811
- Subject:
- NM_016078.6
- Aligned Length:
- 847
- Identities:
- 560
- Gaps:
- 251
Alignment
Query 1 ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG 74
Query 75 ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG 148
Query 149 TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT 222
|||.|||||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 149 TCTATCTTCTCTGTGGGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTGACAATTATCTTGTTGTTGTCGTGT 222
Query 223 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA 296
Query 297 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT 370
Query 371 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC 444
||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||||||
Sbjct 371 CAAGAATCTTTTGGTTGGGACTTATTGCCTGTCCAGTACTGTGGGTGATATTTGCTTTTAGTGCACTCTTCTCC 444
Query 445 TTCACAGTAAAGTGGCTGAGACGGTCTCGCCACATTGCCCAGACTGGTCTGAAAGTCTTGGGCTCAAGAGATCC 518
||||.||||||||||.| |.||||
Sbjct 445 TTCAGAGTAAAGTGGTT--GGCGGT------------------------------------------------- 467
Query 519 TCCCGCTTCCGCCTTCCAAAGCGCTGGGATAACAGGCGTGAGCCGCTGCCCGG-GCCATCCCTCGAGTA-AGTT 590
||.||.||.|.|||.|..|||.|..|| ||||.|| .||| .|||
Sbjct 468 --------------------------GGTTATCATGGGTGTGGTGCTACAAGGTGCCAACC----TGTATGGTT 511
Query 591 TCATCAGGTAGACATTAATTCTTTCACGAGGATCACGGATCGAGCTCTTTACTGGAAACCTGCGCCCCGCCTTA 664
.|||||||| |.||..||||| |
Sbjct 512 ACATCAGGT---------------------------------------------GTAAGGTGCGC--------A 532
Query 665 GTTCTCCACCTCTTCGTGCGGCTCCAG---GCAACTGCCAA-CAG-ATGGCGCCCGCCCGCCTATTTC-TCTCC 732
| ||| |||..| || ||| |||| |||.||| |.|
Sbjct 533 G-----------------------CAGAAAGCATTT---AACCAGCATGG-----------CTACTTCATAT-- 567
Query 733 TTGCGGCTTTGGGCCTGGAGGGGAGGTGGGGAGAGTCCCAATAGCAG-----AGGA------ACTGGTGAGCCC 795
||||| |.||||| |.|| |||||.||
Sbjct 568 -------TTTGG----------------------------AAAGCAGTTTTTAAGACAAAACACTGGAGA---- 602
Query 796 GGGCCAAAATTTCATCTGGCATCCGGAATGCAT 828
|.|||.|.|.|||
Sbjct 603 -----------TGATCAGACTTCC--------- 615