Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09862
- Subject:
- XM_006506643.3
- Aligned Length:
- 1651
- Identities:
- 743
- Gaps:
- 788
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCATTCCTGTTGGAAGATGAAGCTTCAGAATGAGAAGACTTTGGGACATTCCATGAGTCATCCAAGCAACAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTAAGGCTGGGAGTAGTCCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAACCAGGACATCTGCAGTTCCAGTGCAGTGTTTTCTGAGTGTTGTCACTTCAGTCCCGTGCAGTCTGCTGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTTGAAAGCTCCTCCATGCCAGAGTTCTCTGACACAAGGGCTCACTGTGACAGTTCTATGTAAAGACACATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGGCATCAAAGAAAAATCCCTTTGGTTCAGACTGGGACCAAGTCTTGACGCCCGCTAAAAATACTAAGACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGAGCACTCAGATTCTCAAAGTCACTAAGTGATGTGGGTGAGAAGACCCAGGAGAGTTTGGAAAGCTTTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATATGGAAAGAACTTGTTCTGAAGGGAAATTGGTGCTTCCTCAAGGTTCATCTCTCAAAAAGAACAGGCTCCG 518
Query 1 ------------ATGAGCATGCCACTGCATCAGATCTCTGCCATTCC-----------------ATCCCAGGAT 45
|.|||||...|||||| .||...|||.|||||||| |||||....|
Sbjct 519 TCATAAAGAAAAAAGAGCAGAGCACTGC-CCACCCCTCAGCCATTCCAAACACTCTCCTATCTTATCCCTTTCT 591
Query 46 GCCATC---TCTGCTAGAGTCT-ACAGAAGTAAGAC---CAAAGAAA---------------------AGGAGA 91
.|||.| ||.||| |||| |.|||.|.||| | |||.|.|| ||||||
Sbjct 592 ACCAACCATTCAGCT---GTCTCAAAGAGGGAAG-CTGGCAAGGGAAGCGTGCGCATCCCACTTTTGGAGGAGA 661
Query 92 --------GGGAAGAACAGAATGAGAAG---------ACTTTGGGACAT-TTCATG------AGTCATTCAAG- 140
||..||..|||..||||||| |||..||.||.| |||..| .||...|||||
Sbjct 662 AAGCTGATGGCGAGGCCAGGTTGAGAAGCCAGCGACTACTCCGGTACCTGTTCTCGCTCTCCCGTGGCTCAAGT 735
Query 141 ---------CAACAT---TTCTAAG-GCTGG-----------------------------GAGTCCTCC----- 167
|.|||| |||.|.| ||||| .||||||||
Sbjct 736 GCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTG 809
Query 168 ---GTCAG------------------------------------------------------CATCAGCT---- 180
|.||| |||||.||
Sbjct 810 GCTGGCAGGGAGCATGGACTTCTGTTCTGATGAAATGGGAGATGACGACGTCTTTGAGGATACATCATCTGCCA 883
Query 181 ----------CCGGCTCCGGTGTCC---------------------------------------TCCTTCTCTC 205
|.||.|||.|.||.| |||||||||
Sbjct 884 AATTGAAGAACAGGGTCCTGCGTGCACCCCTCTGCTCAGTAGAGAAGGACAGTGACCTGGATTGTCCTTCTCT- 956
Query 206 GC--------------ACTTCTATCACGCC---ATCCAGC--CAGGACAT--CTGCAGGATCTGCCACTGTGAA 258
|| |||.|.|||.|.|| .|||| | ||||..|| ||||||||||||||||||||||
Sbjct 957 GCTCTCTGAAAAATGTACTCCCATCTCTCCTGTGTCCA-CTTCAGGGGATGCCTGCAGGATCTGCCACTGTGAA 1029
Query 259 GGAGATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCT 332
||.|||||.||||||||.||||||||||||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1030 GGGGATGACGAGAGCCCTCTGATCACCCCCTGTCACTGCACAGGGAGCCTCCATTTCGTGCATCAGGCTTGCCT 1103
Query 333 GCAGCAGTGGATCAAGAGCTCCGACACGCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCATGGAGACCAAGC 406
||||||||||||||||||.||.|||||.||||||||.||.|||||||||||.||||||||||||||||||||||
Sbjct 1104 GCAGCAGTGGATCAAGAGTTCTGACACACGCTGCTGTGAACTCTGCAAGTACGAGTTCATCATGGAGACCAAGC 1177
Query 407 TGAAGCCACTGAGAAAATGGGAGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACA 480
||||.||..||||.|||||||||||||||||||||||..||||.|||||||||||||||||||||||||||||.
Sbjct 1178 TGAAACCTTTGAGGAAATGGGAGAAGTTGCAGATGACTGCCAGTGAGCGCAGGAAGATCATGTGCTCAGTGACC 1251
Query 481 TTCCACGTCATTGCCATCACATGTGTGGTCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTGAGGAGATCAA 554
|||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.||.|||||.|||||
Sbjct 1252 TTCCATGTCATTGCTATCACCTGTGTGGTCTGGTCCTTGTATGTGCTCATTGACCGCACAGCAGAGGAAATCAA 1325
Query 555 GCAGGGGCAGGCAACAGGAATCCTAGAATGGCCCTTTTGGACTAAATTGGTGGTTGTGGCCATCGGCTTCACCG 628
||||||.||||.|||||||||||||||.|||||.||.|||||.||..||||.||||||||||||||||||||.|
Sbjct 1326 GCAGGGTCAGGTAACAGGAATCCTAGAGTGGCCTTTCTGGACGAAGCTGGTAGTTGTGGCCATCGGCTTCACTG 1399
Query 629 GAGGACTTCTTTTTATGTATGTTCAGTGTAAAGTGTATGTGCAATTGTGGAAGAGACTCAAGGCCTATAATAGA 702
||||||||||.|||||||||||||||||.||.|||||..|.||.||.|||||.|||||||||||.||.||||||
Sbjct 1400 GAGGACTTCTCTTTATGTATGTTCAGTGCAAGGTGTACCTACAGTTATGGAAAAGACTCAAGGCTTACAATAGA 1473
Query 703 GTGATCTATGTTCAAAACTGTCCAGAAACAAGCAAAAAGAATATTTTTGAAAAATCTCCACTAACAGAGCCCAA 776
||||||||||||||.|||||||||||||||||.||||||||||||||||||||.|||.||||.||||||||||.
Sbjct 1474 GTGATCTATGTTCAGAACTGTCCAGAAACAAGTAAAAAGAATATTTTTGAAAAGTCTGCACTTACAGAGCCCAC 1547
Query 777 CTTTGAAAATAAACATGGACATGGAATCTGTCATTCCGACACAAACTCTTCTTGTTGCACAGAGCCTGAAGACA 850
|.|||||||||||.|.|||||||||||.|||||||||..|||||| |||||.||||||||||||||||||||
Sbjct 1548 CCTTGAAAATAAAGAAGGACATGGAATGTGTCATTCCACCACAAA---TTCTTCTTGCACAGAGCCTGAAGACA 1618
Query 851 CTGGAGCAGAAATCATTCACGTC 873
|||||||||||||.|||.|||||
Sbjct 1619 CTGGAGCAGAAATTATTAACGTC 1641
