Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09988
Subject:
NM_001350999.1
Aligned Length:
1275
Identities:
1222
Gaps:
51

Alignment

Query    1  ATGTTCCCACCAGCCAGGGGGAAGGAGCTGCTCTCGTTTGAGGATGTGGCGATGTACTTCACCAGAGAGGAGTG  74
                                                               |||||||||||||||||||||||
Sbjct    1  ---------------------------------------------------ATGTACTTCACCAGAGAGGAGTG  23

Query   75  GGGCCACCTCAACTGGGGTCAGAAGGACCTCTACCGAGATGTGATGTTGGAGAACTACAGGAACATGGTCTTGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   24  GGGCCACCTCAACTGGGGTCAGAAGGACCTCTACCGAGATGTGATGTTGGAGAACTACAGGAACATGGTCTTGC  97

Query  149  TGGGATTTCAGTTTCCCAAACCTGAGATGATCTGTCAGCTGGAGAACTGGGACGAGCAGTGGATCCTGGATCTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   98  TGGGATTTCAGTTTCCCAAACCTGAGATGATCTGTCAGCTGGAGAACTGGGACGAGCAGTGGATCCTGGATCTA  171

Query  223  CCGAGAGCTGGGAATAGGAAGGCTTCCGGTAGTGCTTGCCCAGGTTCTGAAGCCAGACACAAGATGAAAAAGCT  296
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  172  CCGAGAACTGGGAATAGGAAGGCTTCCGGTAGTGCTTGCCCAGGTTCTGAAGCCAGACACAAGATGAAAAAGCT  245

Query  297  AACTCCAAAACAGAAATTTTCTGAAGATTTAGAGTCATATAAGATATCAGTGGTAATGCAGGAATCAGCTGAGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  246  AACTCCAAAACAGAAATTTTCTGAAGATTTAGAGTCATATAAGATATCAGTGGTAATGCAGGAATCAGCTGAGA  319

Query  371  AACTTTCAGAAAAGTTACATAAGTGTAAAGAATTTGTGGACAGTTGCAGGCTTACTTTCCCTACTAGTGGTGAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  320  AACTTTCAGAAAAGTTACATAAGTGTAAAGAATTTGTGGACAGTTGCAGGCTTACTTTCCCTACTAGTGGTGAT  393

Query  445  GAATACAGCAGGGGCTTCCTTCAAAACCTTAACCTTATTCAAGATCAGAATGCGCAAACAAGGTGGAAGCAGGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  394  GAATACAGCAGGGGCTTCCTTCAAAACCTTAACCTTATTCAAGATCAGAATGCGCAAACAAGGTGGAAGCAGGG  467

Query  519  CAGATATGATGAGGATGGCAAACCCTTCAATCAAAGATCTTTGCTTTTGGGGCATGAGCGAATTCTCACAAGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  468  CAGATATGATGAGGATGGCAAACCCTTCAATCAAAGATCTTTGCTTTTGGGGCATGAGCGAATTCTCACAAGAG  541

Query  593  CAAAGTCTTATGAATGCAGTGAATGTGGAAAAGTCATTAGGCGTAAGGCATGGTTTGATCAACATCAAAGAATT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  542  CAAAGTCTTATGAATGCAGTGAATGTGGAAAAGTCATTAGGCGTAAGGCATGGTTTGATCAACATCAAAGAATT  615

Query  667  CACTTTTTAGAGAATCCTTTTGAGTGTAAGGTCTGTGGGCAAGCCTTCAGACAGCGGTCAGCTCTTACGGTCCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  616  CACTTTTTAGAGAATCCTTTTGAGTGTAAGGTCTGTGGGCAAGCCTTCAGACAGCGGTCAGCTCTTACGGTCCA  689

Query  741  TAAACAGTGTCACCTGCAAAACAAGCCATACAGATGTCATGACTGTGGAAAGTGTTTTCGGCAGCTCGCGTATA  814
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  690  TAAACAGTGTCACCTGCAAAACAAGCCATACAGATGTCATGACTGTGGAAAGTGTTTTCGGCAGCTCGCGTATC  763

Query  815  TTGTTGAACATAAGAGGATTCACACCAAAGAAAAACCTTATAAATGTAGCAAATGTGAAAAAACGTTTAGTCAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  764  TTGTTGAACATAAGAGGATTCACACCAAAGAAAAACCTTATAAATGTAGCAAATGTGAAAAAACGTTTAGTCAG  837

Query  889  AATTCAACCCTTATTCGACATCAGGTGATCCATAGTGGAGAAAAACGCCATAAATGCCTTGAGTGTGGAAAAGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  838  AATTCAACCCTTATTCGACATCAGGTGATCCATAGTGGAGAAAAACGCCATAAATGCCTTGAGTGTGGAAAAGC  911

Query  963  CTTTGGCCGGCATTCAACCCTTCTATGTCATCAACAGATTCACAGTAAACCGAACACCCATAAATGCAGTGAAT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  912  CTTTGGCCGGCATTCAACCCTTCTATGTCATCAACAGATTCACAGTAAACCGAACACCCATAAATGCAGTGAAT  985

Query 1037  GTGGACAGTCCTTTGGTAGGAATGTGGATCTCATTCAGCATCAAAGAATCCATACAAAGGAGGAATTCTTTCAA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  986  GTGGACAGTCCTTTGGTAGGAATGTGGATCTCATTCAGCATCAAAGAATCCATACAAAGGAGGAATTCTTTCAA  1059

Query 1111  TGTGGAGAATGTGGGAAAACGTTTAGTTTTAAGAGGAATCTTTTTCGACATCAGGTCATTCACACTGGAAGCCA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060  TGTGGAGAATGTGGGAAAACGTTTAGTTTTAAGAGGAATCTTTTTCGACATCAGGTCATTCACACTGGAAGCCA  1133

Query 1185  ACCCTACCAATGTGTCATATGTGGAAAATCTTTCAAGTGGCACACAAGCTTTATTAAGCACCAGGGCACTCACA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134  ACCCTACCAATGTGTCATATGTGGAAAATCTTTCAAGTGGCACACAAGCTTTATTAAGCACCAGGGCACTCACA  1207

Query 1259  AAGGACAGATATCCACA  1275
            |||||||||||||||||
Sbjct 1208  AAGGACAGATATCCACA  1224

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