Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10033
- Subject:
- XR_001749542.1
- Aligned Length:
- 2358
- Identities:
- 1125
- Gaps:
- 1232
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGGGTGGGGGAAAGGGATGGAGTTTCGGCCTGGGGCGGCGGGGGCGGCCCAGAAAAGGCCTAGCGTCCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGTGTGGGTGTAGCGTCCAGGGCGCGTCGGTCTCTATGGCAACGCTCCACACGCGGAGGTCGGGTACGGTTAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGTGGCCACAAAGAAAGTTATTTGTCTCTGTCTTGGCAAGGCTGGGAGGAAAGTTTTAGCTAAGAAACTCAGC 222
Query 1 ------------ATGGATAAGTACGATGCGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGC 62
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCATTGGAGACCATGGATAAGTACGATGTGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGC 296
Query 63 TAAAGGGAAATCAGATAGCAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAG 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAGGGAAATCAGATAGCAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAG 370
Query 137 AAGCTTCAAAGAAAGAAGTGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTT 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCTTCAAAGAAAGAAGTGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTT 444
Query 211 CAAGAGAATGGCAGGCTGTTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAGAGAATGGCAGGCTGTTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACA 518
Query 285 ACGGGGTGTGTTATTTAGTGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTC 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACGGGGTGTGTTATTTAGTGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTC 592
Query 359 ATGACAGGAAGATATTACACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAG 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGACAGGAAGATATTACACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAG 666
Query 433 CTTGGGGACTTTGGTATAGCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTGGGGACTTTGGTATAGCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTA 740
Query 507 CTACCTGTCCCCAGAGATCTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCT 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTACCTGTCCCCAGAGATCTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCT 814
Query 581 TATATGAGCTCTGCACACTTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TATATGAGCTCTGCACACTTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAA 888
Query 655 GCACATTTTGCCCCAATATCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATC 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCACATTTTGCCCCAATATCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATC 962
Query 729 TCCTCGAGACCGACCATCCATAAATTCCATTTTGAAAAGGCCCTTTTTAGAGAATCTTATTCCCAAATATTTGA 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCTCGAGACCGACCATCCATAAATTCCATTTTGAAAAGGCCCTTTTTAGAGAATCTTATTCCCAAATATTTGA 1036
Query 803 CTCCTGAGGTCATTCAGGAAGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCT 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTCCTGAGGTCATTCAGGAAGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCT 1110
Query 877 GGGAAGGTGGTCCAGAAGTGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATC 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGAAGGTGGTCCAGAAGTGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATC 1184
Query 951 TGTGCCAATTAAAAGGAATGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGAT 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGTGCCAATTAAAAGGAATGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGAT 1258
Query 1025 CTATAAAAATGATAGAAAGACCCAAAATTGCTGCTGTCTGTGGACATTATGATTATTATTATGCTCAACTTGAT 1098
||
Sbjct 1259 CT------------------------------------------------------------------------ 1260
Query 1099 ATGCTGAGGAGGAGAGCCCACAAACCAAGTTATCACCCTATTCCTCAAGAAAATACTGGAGTTGAGGATTACGG 1172
Sbjct 1261 -------------------------------------------------------------------------- 1260
Query 1173 TCAGGAAACGAGGCATGGTCCATCCCCAAGTCAATGGCCTGCTGAGTACCTTCAGAGAAAATTTGAAGCTCAAC 1246
||||||||||||||||||||||||||||||||||||||
Sbjct 1261 ------------------------------------GCCTGCTGAGTACCTTCAGAGAAAATTTGAAGCTCAAC 1298
Query 1247 AATATAAGTTGAAAGTGGAGAAGCAATTGGGTCTTCGTCCATCTTCTGCCGAGCCAAATTACAACCAGAGACAA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 AATATAAGTTGAAAGTGGAGAAGCAATTGGGTCTTCGTCCATCTTCTGCCGAGCCAAATTAC------------ 1360
Query 1321 GAGCTAAGAAGTAATGGAGAAGAGCCTAGATTCCAGGAGCTGCCATTTAGGAAAAACGAAATGAAGGAACAGGA 1394
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1395 ATATTGGAAGCAGTTAGAGGAAATACGCCAACAGTACCACAATGACATGAAAGAAATTAGAAAGAAGATGGGGA 1468
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1469 GAGAACCAGAGGAGAACTCAAAAATAAGTCATAAAACCTATTTGGTGAAGAAGAGTAACCTGCCTGTCCATCAA 1542
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1543 GATGCATCTGAGGGAGAAGCACCTGTGCAGATGGAATTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACG 1616
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1617 ATCTTGGCTCACCGCAACCTCCGCCTCCCAGGACATTGAAAAAGACTTGAAACAAATGAGGCTTCAGAACACAA 1690
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1691 AGGAAAGTAAAAATCCAGAACAGAAATATAAAGCTAAGAAGGGGGTAAAATTTGAAATTAATTTAGACAAATGT 1764
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1765 ATTTCTGATGAAAACATCCTCCAAGAGGAAGAGGCAATGGATATACCAAATGAAACTTTGACCTTTGAGGATGG 1838
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1839 CATGAAGTTTAAGGAATATGAATGTGTAAAGGAGCATGGAGATTATACAGACAAAGCATTTGAAAAACTTCACT 1912
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1913 GCCCAGAAGCAGGGTTTTCCACGCAGACTGTAGCTGCTGTGGGAAACAGGAGGCAGTGGGATGGAGGAGCGCCT 1986
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 1987 CAGACTCTGCTGCAGATGATGGCAGTGGCCGACATCACCTCCACCTGCCCCACGGGGCCTGACAGTGAGTCTGT 2060
Sbjct 1361 -------------------------------------------------------------------------- 1360
Query 2061 GCTTAGCGTCAGTCGTCAGGAAGGGAAGACCAAGGACCCGTACAGCCCAGTGCTCATCCTGATG 2124
Sbjct 1361 ---------------------------------------------------------------- 1360
