Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10171
Subject:
XR_001744732.2
Aligned Length:
2444
Identities:
385
Gaps:
2047

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG  370

Query    1  ----------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  52
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  444

Query   53  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  518

Query  127  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  592

Query  201  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  666

Query  275  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT----  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  667  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA  740

Query  345  ----------------------TAAGAAC-----ATGGAAG------------------GGGTGCTGATGGACG  373
                                  |||||||     .||||||                  .|||||..|     |
Sbjct  741  CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCA-----G  809

Query  374  TGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG--------------------------------------  402
            .||||  |.|...|||.|||.|   ||  |.|||||                                      
Sbjct  810  AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAATCGGCTCCCAGACACCTGCCACTCGTG  883

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  884  AATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGGCCCTGGCGGATCACGGGTGCCCAGGGGC  957

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  958  TCGGAGGCCGCCTCCTCTGGGAAGCCTGCCCAGGTTCCGCTGGACTCCCACAGGCAATACCCCTGGGCCTTCCT  1031

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1032  CGCGGCCCCTGTTGGCCCCAATTCCCCCACCCCCTGCAAGGTCTGTGCCTCTCCTGCAGCCCCGCCACCAACTA  1105

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1106  GGGCGAGAGGAGCTCGCCCCCACCCAAACGTATTGGTTCGATGAAGGAAGGGCCCATGGTTCTGCCACTGGCCC  1179

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1180  TGGACACCCAGTGCTGGTTTCCCGTGGAAGTCCCCCTGGACTGAGTGGCGGCTGGGTGCTCTAGTGATTTGCGA  1253

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1254  CCTGGGGCCTCTGACTCCCATCATGTTGGGAAAGTCGTTGAACCTCACCGGTGAAACGGGCACAGTGAAGTCAT  1327

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1328  TTCCCCGAAGTCTCAGGACTCTGTGTAAGGCTGGGGACAGGGGCTTGTTGGGGCCTAAGGGCACCTTGGGAACT  1401

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1402  GCAGGAGCCCGTTCTGCCTCCATAAGACACTCACTCCTGGCAGGGTCCCCTCTCCGGGCACAGCCCAGATCCAC  1475

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1476  CCCCATCATCCCTCTCCATCTGTGGCTCCCTGCCCCTCACAGAGGATTCATCACTCTGTTCAGAATCCCCAGGA  1549

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1550  CTCCCTAGGGAAGGAGGTCCCAGCCTGGCCTCCCAAGACCGTGCTTGCCCAATTCCAGGACTTCCTCACATGGC  1623

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1624  TCCTACCTCCAGCACAGAAGCGGCACTAAACCAGGTGGTCAATCAGGGAGCACCACCGAGGTTCTGAATGGTCC  1697

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1698  AGGGATGAGCAGTGATGCCTCAAGCTAAGCCAATCAAAGCCTTCCCTGGGATTGTCTCAAGGAGTCCGCAGTGA  1771

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1772  GATTCTGGGTCTCAGTACTGGGAAAGGGTGAGGCTGAGGCTGCCTGCTGTCCTGGGGGCCTCACCCTGCCACCA  1845

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1846  ACAGGAAGCCACACAGAGGGAAGCAGAAATGAGACGCAGCCAGTGAGGGCAGGGTACAAAGGTGAGATCCCGGA  1919

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1920  GAGACAGATGCTGGGACATCATCCTTGGGTACTGGTTCCAACAGTGCCTGCAGATGGAGCCACCCTCGGAGAGT  1993

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1994  CCACAACAGCAGCCAATCCATTCTATGCGTGTCTGAGCTACTTTAAGTCGGGTTTTTGACTGTTTGAATGAGAG  2067

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2068  TCTCATCTTGGCTAGGCACCATGGCGCAACAACTGGGGAGGTGGAGGTAGGAAGATTGCTTGAGGCCAAGAGTC  2141

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2142  CCAGAGCAGCCTGGGCAACCTATCAAGACGCTGTCTTTACGAAAAGAAAAAAAACTAGCTAGGTGTGGTGGTGC  2215

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2216  GTGCCTGTGGTCCCAGCTACTGGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAAGTGGAGGCTGCAGTG  2289

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2290  ACCTATGATGGCACCACTGTACTCCAGCCTGGGTGACAGAGCAAGACCCTGTCTAAAAAAAAAAAAAAAAAAAA  2363

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2364  GAAGTCCCACCGAATACCTTCATGCAGTGAAGGTCACCCCATCTGAAAAATAAAGCCTGGGCACTTGGGCTTGG  2437

Query  403  --  402
              
Sbjct 2438  TA  2439

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