Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10208
- Subject:
- NR_138486.2
- Aligned Length:
- 3529
- Identities:
- 1665
- Gaps:
- 1864
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGAGAGACGAGGGCAGCGGAGGAGGCGAGGAGCGCCGGGTACCGGGCCGGGGGAGCCGCGGGCTCTCGGGGA 74
Query 1 -----------ATGAACAAGCTTTACATCGGGAACCTGAGCCCCGCCGTCACCGCCGACGACCTCCGGCAGCTC 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGAGACGGATGATGAACAAGCTTTACATCGGGAACCTGAGCCCCGCCGTCACCGCCGACGACCTCCGGCAGCTC 148
Query 64 TTTGGGGACAGGAAGCTGCCCCTGGCGGGACAGGTCCTGCTGAAGTCCGGCTACGCCTTCGTGGACTACCCCGA 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTTGGGGACAGGAAGCTGCCCCTGGCGGGACAGGTCCTGCTGAAGTCCGGCTACGCCTTCGTGGACTACCCCGA 222
Query 138 CCAGAACTGGGCCATCCGCGCCATCGAGACCCTCTCGGGTAAAGTGGAATTGCATGGGAAAATCATGGAAGTTG 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCAGAACTGGGCCATCCGCGCCATCGAGACCCTCTCGGGTAAAGTGGAATTGCATGGGAAAATCATGGAAGTTG 296
Query 212 ATTACTCAGTCTCTAAAAAGCTAAGGAGCAGGAAAATTCAGATTCGAAACATCCCTCCTCACCTGCAGTGGGAG 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATTACTCAGTCTCTAAAAAGCTAAGGAGCAGGAAAATTCAGATTCGAAACATCCCTCCTCACCTGCAGTGGGAG 370
Query 286 GTGTTGGATGGACTTTTGGCTCAATATGGGACAGTGGAGAATGTGGAACAAGTCAACACAGACACAGAAACCGC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGTTGGATGGACTTTTGGCTCAATATGGGACAGTGGAGAATGTGGAACAAGTCAACACAGACACAGAAACCGC 444
Query 360 CGTTGTCAACGTCACATATGCAACAAGAGAAGAAGCAAAAATAGCCATGGAGAAGCTAAGCGGGCATCAGTTTG 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTTGTCAACGTCACATATGCAACAAGAGAAGAAGCAAAAATAGCCATGGAGAAGCTAAGCGGGCATCAGTTTG 518
Query 434 AGAACTACTCCTTCAAGATTTCCTACATCCCGGATGAAGAGGTGAGCTCCCCTTCGCCCCCTCAGCGAGCCCAG 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAACTACTCCTTCAAGATTTCCTACATCCCGGATGAAGAGGTGAGCTCCCCTTCGCCCCCTCAGCGAGCCCAG 592
Query 508 CGTGGGGACCACTCTTCCCGGGAGCAAGGCCACGCCCCTGGGGGCACTTCTCAGGCCAGACAGATTGATTTCCC 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGTGGGGACCACTCTTCCCGGGAGCAAGGCCACGCCCCTGGGGGCACTTCTCAGGCCAGACAGATTGATTTCCC 666
Query 582 GCTGCGGATCCTGGTCCCCACCCAGTTTGTTGGTGCCATCATCGGAAAGGAGGGCTTGACCATAAAGAACATCA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGCGGATCCTGGTCCCCACCCAGTTTGTTGGTGCCATCATCGGAAAGGAGGGCTTGACCATAAAGAACATCA 740
Query 656 CTAAGCAGACCCAGTCCCGGGTAGATATCCATAGAAAAGAGAACTCTGGAGCTGCAGAGAAGCCTGTCACCATC 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTAAGCAGACCCAGTCCCGGGTAGATATCCATAGAAAAGAGAACTCTGGAGCTGCAGAGAAGCCTGTCACCATC 814
Query 730 CATGCCACCCCAGAGGGGACTTCTGAAGCATGCCGCATGATTCTTGAAATCATGCAGAAAGAGGCAGATGAGAC 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CATGCCACCCCAGAGGGGACTTCTGAAGCATGCCGCATGATTCTTGAAATCATGCAGAAAGAGGCAGATGAGAC 888
Query 804 CAAACTAGCCGAAGAGATTCCTCTGAAAATCTTGGCACACAATGGCTTGGTTGGAAGACTGATTGGAAAAGAAG 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAAACTAGCCGAAGAGATTCCTCTGAAAATCTTGGCACACAATGGCTTGGTTGGAAGACTGATTGGAAAAGAAG 962
Query 878 GCAGAAATTTGAAGAAAATTGAACATGAAACAGGGACCAAGATAACAATCTCATCTTTGCAGGATTTGAGCATA 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGAAATTTGAAGAAAATTGAACATGAAACAGGGACCAAGATAACAATCTCATCTTTGCAGGATTTGAGCATA 1036
Query 952 TACAACCCGGAAAGAACCATCACTGTGAAGGGCACAGTTGAGGCCTGTGCCAGTGCTGAGATAGAGATTATGAA 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TACAACCCGGAAAGAACCATCACTGTGAAGGGCACAGTTGAGGCCTGTGCCAGTGCTGAGATAGAGATTATGAA 1110
Query 1026 GAAGCTGCGTGAGGCCTTTGAAAATGATATGCTGGCTGTTAACCAACAAGCCAATCTGATCCCAGGGTTGAACC 1099
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAAGCTGCGTGAGGCCTTTGAAAATGATATGCTGGCTGTTAAC------------------------------- 1153
Query 1100 TCAGCGCACTTGGCATCTTTTCAACAGGACTGTCCGTGCTATCTCCACCAGCAGGGCCCCGCGGAGCTCCCCCC 1173
Sbjct 1154 -------------------------------------------------------------------------- 1153
Query 1174 GCTGCCCCCTACCACCCCTTCACTACCCACTCCGGATACTTCTCCAGCCTGTACCCCCATCACCAGTTTGGCCC 1247
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 ------------------------ACCCACTCCGGATACTTCTCCAGCCTGTACCCCCATCACCAGTTTGGCCC 1203
Query 1248 GTTCCCGCATCATCACTCTTATCCAGAGCAGGAGATTGTGAATCTCTTCATCCCAACCCAGGCTGTGGGCGCCA 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 GTTCCCGCATCATCACTCTTATCCAGAGCAGGAGATTGTGAATCTCTTCATCCCAACCCAGGCTGTGGGCGCCA 1277
Query 1322 TCATCGGGAAGAAGGGGGCACACATCAAACAGCTGGCGAGATTCGCCGGAGCCTCTATCAAGATTGCCCCTGCG 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1278 TCATCGGGAAGAAGGGGGCACACATCAAACAGCTGGCGAGATTCGCCGGAGCCTCTATCAAGATTGCCCCTGCG 1351
Query 1396 GAAGGCCCAGACGTCAGCGAAAGGATGGTCATCATCACCGGGCCACCGGAAGCCCAGTTCAAGGCCCAGGGACG 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 GAAGGCCCAGACGTCAGCGAAAGGATGGTCATCATCACCGGGCCACCGGAAGCCCAGTTCAAGGCCCAGGGACG 1425
Query 1470 GATCTTTGGGAAACTGAAAGAGGAAAACTTCTTTAACCCCAAAGAAGAAGTGAAGCTGGAAGCGCATATCAGAG 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1426 GATCTTTGGGAAACTGAAAGAGGAAAACTTCTTTAACCCCAAAGAAGAAGTGAAGCTGGAAGCGCATATCAGAG 1499
Query 1544 TGCCCTCTTCCACAGCTGGCCGGGTGATTGGCAAAGGTGGCAAGACCGTGAACGAACTGCAGAACTTAACCAGT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TGCCCTCTTCCACAGCTGGCCGGGTGATTGGCAAAGGTGGCAAGACCGTGAACGAACTGCAGAACTTAACCAGT 1573
Query 1618 GCAGAAGTCATCGTGCCTCGTGACCAAACGCCAGATGAAAATGAGGAAGTGATCGTCAGAATTATCGGGCACTT 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 GCAGAAGTCATCGTGCCTCGTGACCAAACGCCAGATGAAAATGAGGAAGTGATCGTCAGAATTATCGGGCACTT 1647
Query 1692 CTTTGCTAGCCAGACTGCACAGCGCAAGATCAGGGAAATTGTACAACAGGTGAAGCAGCAGGAGCAGAAATACC 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 CTTTGCTAGCCAGACTGCACAGCGCAAGATCAGGGAAATTGTACAACAGGTGAAGCAGCAGGAGCAGAAATACC 1721
Query 1766 CTCAGGGAGTCGCCTCACAGCGCAGCAAG--------------------------------------------- 1794
|||||||||||||||||||||||||||||
Sbjct 1722 CTCAGGGAGTCGCCTCACAGCGCAGCAAGTGAGGCTCCCACAGGCACCAGCAAAACAACGGATGAATGTAGCCC 1795
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 1796 TTCCAACACCTGACAGAATGAGACCAAACGCAGCCAGCCAGATCGGGAGCAAACCAAAGACCATCTGAGGAATG 1869
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 1870 AGAAGTCTGCGGAGGCGGCCAGGGACTCTGCCGAGGCCCTGAGAACCCCAGGGGCCGAGGAGGGGCGGGGAAGG 1943
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 1944 CAAAGCAGTGCTCTGAGTATCACATCACACAAAAGGAACAAAAGCGAAACACACAAACCAGCCTCAACTTACAC 2017
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2018 TTGGTTACTCAAAAGAACAAGAGTCAATGGTACTTGTCCTAGCGTTTTGGAAGAGGAAAACAGGAACCCACCAA 2091
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2092 ACCAACCAATCAACCAAACAAAGAAAAAATTCCACAATGAAAGAATGTATTTTGTCTTTTTGCATTTTGGTGTA 2165
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2166 TAAGCCATCAATATTCAGCAAAATGATTCCTTTCTTTAAAAAAAAAAAATGTGGAGGAAAGTAGAAATTTACCA 2239
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2240 AGGTTGTTGGCCCAGGGCGTTAAATTCACAGATTTTTTTAACGAGAAAAACACACAGAAGAAGCTACCTCAGGT 2313
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2314 GTTTTTACCTCAGCACCTTGCTCTTGTGTTTCCCTTAGAGATTTTGTAAAGCTGATAGTTGGAGCATTTTTTTA 2387
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2388 TTTTTTTAATAAAAATGAGTTGGAAAAAAAATAAGATATCAACTGCCAGCCTGGAGAAGGTGACAGTCCAAGTG 2461
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2462 TGCAACAGCTGTTCTGAATTGTCTTCCGCTAGCCAAGAACCTATATGGCCTTCTTTTGGACAAACCTTGAAAAT 2535
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2536 GTTTATTTAAAAAAAAAAAAGATGACAAAGAAAAACAGAGAGAGAGAATATTGGAGATGTCCTGAATTTTAATA 2609
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2610 GGGTACGCGCCATTAGGGCTTTTTGCGCTAAAGGATGAACATGTACTGGTTTATGTGGACAAGCCATTATACCA 2683
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2684 CCAGACTGCAATGCCAGTTTCCTCTACTGCAAACAGTGTTCTGTGACAAAAAAAAAAAAAAAAAAAAGAAAAAA 2757
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2758 AAAGAAAAAACAGAAATATATCCAGCTAACAAGATCCTGGTGTCTTGGTGTTTTATTTTACTAGGCATTGCCTC 2831
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2832 ATCCCAGGTGTCAGCTGAGTCCTAGCTCTGAGGGACCTGGGCAGACAGGCGGTAGGTGTGACCTGGATCCACAC 2905
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2906 AGCTACTCTGAGAAAGCTGGTTTTGCCCAGGAAAGTCTTTGGGAGAAGCTAAACTAGATCGGTGGTCAAAGTGT 2979
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2980 AGTCCCCAGACCAGCAGCATCAGCTATCATCTGGGAACTTGTTAGAAATGTAGATTCTTGGGGTCCACCTTGAA 3053
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 3054 TCAGAAATCCTGGGGGTGAGGCCCAGCAACCTTTTCAGCAAGGCCTCTGGGTGATTGCTGTGCGCACTGAAGTT 3127
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 3128 TCCGAACCTCGGAGCTAGAGGGATGGATCGACTGCATGTCAAGCTAGAGAAGACCAGTCTATCCTTAAGGAACT 3201
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 3202 GCAAGCCTGGCCAGGCAAAGCTGCTTTTTAAGTGGAGGAAAGGGGGAGGATAATATGCCCGGCAGTTCCGGGAA 3275
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 3276 GAGGCACTTCACGCCTCCACGGGAAGCTCACTAGTAAGTGCAGGCATACCTCAGGAACGTCGCAGGTTCAGTTC 3349
Query 1795 --------------------------------------------------- 1794
Sbjct 3350 CAGACCACCACAGTAAAGCGAACTTTGCAATAAAATGAGTCATACACGTTT 3400
