Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10253
- Subject:
- NM_001324292.2
- Aligned Length:
- 3174
- Identities:
- 1377
- Gaps:
- 1797
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGTGCGTGTTTGTTACCGTAGGGACCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGGCGCCCGACAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCAAAAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCAGTACTGAGTCGTTTACTCTGGATGTTTACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGTTTGGAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATAAACGAAAAGTTGATGAACAATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTGTTACTGCTACCCATCCTACCTGCACCCTGCTTTTTCCCTCTTGCCACGCTTTTTTTCCTCTCCCTCTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCCCACCCTGTACAAAATGCATAAAGGATGGAAAAACTACTGCAGCCAGAAGTCTTTGAATGAGGCATCAATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCGGAGCAGTTGTTTTGCAGCCAGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCTCATATATGAGGGAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCAACAAACTTTTGAGTCTTATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTGCTGGCCAGCTGGAAATAAGAGCTCTTTCTCTAATTTATAATCGGGATTTCATTCTTTATCGCTTTCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAACCTCCAACTTATGTCACAGATAATGGCTATGAAGACAAGATTCTACTCTGCTACTCAAGTAGTGGTCACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGATTCTGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGAAATTCTCTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAGATGTGTTTGTTGTGGATGAAGAAGAGTTGAAGACTGCGATTAAATTGTTTCGAAGTGGTTCTAAGAAGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGAAATAATGCTGTAACTGGAAGCGAGGATGCCCATACTGATTACAAGAGTTCAAATCAGAATAGGATGGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCTACAATAAAGGAACAGAAGAAACAAAGTCTCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAATGTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTTGATGTTTGGTTGGACAGCAGAAAAGAACTTCAAAAATCTGATTACATGGAGTATGCTGGGAGACAGTACT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTTGGGAGACAAGTGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTATAATGCTCATATCCAGGAAGTTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATGAGAACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACTGGCTAACTTAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGAGGTTACCAGAAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCCTGGGGGTTATGTCCCGGAAATAGTTATATCAGAGATGGACATAAAGCAACAGAAGAAGATGTTCAAGAAA 1776
Query 1 ---------------------ATGACTATGGCTTACGGCAAGGGAGACCCCCTCCTCCCACCCAGGCTGCAGCA 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATTCGAGGGAAAGAAGTTTACATGACTATGGCTTACGGCAAGGGAGACCCCCTCCTCCCACCCAGGCTGCAGCA 1850
Query 54 CAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCACAGACAGCTGGCAATGTTATGTCTAATGAACATT 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCACAGACAGCTGGCAATGTTATGTCTAATGAACATT 1924
Query 128 TTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC 1998
Query 202 AGGCACAACATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGGCACAACATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAA 2072
Query 276 CTTCTCTTATAGATCTCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATG 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTTCTCTTATAGATCTCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATG 2146
Query 350 GATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAACTATTACTTTTTATGAAGTTGAAGAAGGG 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAACTATTACTTTTTATGAAGTTGAAGAAGGG 2220
Query 424 GATGAGACTGCTTATCCAACTTTACCTAATCATGGAGGTCCCTCTACAATGGTTCCTGCTACTTCAGGATACTG 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GATGAGACTGCTTATCCAACTTTACCTAATCATGGAGGTCCCTCTACAATGGTTCCTGCTACTTCAGGATACTG 2294
Query 498 TGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAAATG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAAATG 2368
Query 572 GGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACTTCAGGTGTTTATAGCACAACTGCA 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACTTCAGGTGTTTATAGCACAACTGCA 2442
Query 646 TCTACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCTCAGGACACAGTTACCTCATACAA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TCTACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCTCAGGACACAGTTACCTCATACAA 2516
Query 720 CTACCCCCAGAAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCCTGTGCCAATAATGTTCCAGCTCCAGTCT 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CTACCCCCAGAAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCCTGTGCCAATAATGTTCCAGCTCCAGTCT 2590
Query 794 TATCTAACGGTGCAGCGGCTAATCAAGCTATTAGTACCACTTCAGTTTCCTCACAGAATGCTATACAGCCTCTC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TATCTAACGGTGCAGCGGCTAATCAAGCTATTAGTACCACTTCAGTTTCCTCACAGAATGCTATACAGCCTCTC 2664
Query 868 TTTGTATCTCCACCTACACACGGCAGGCCAGATACAAAAGTTTTGCAGTACTATTTCAATCTAGGATTGCAGTG 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TTTGTATCTCCACCTACACACGGCAGGCCAGATACAAAAGTTTTGCAGTACTATTTCAATCTAGGATTGCAGTG 2738
Query 942 CTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGCAGCAGCTTCATGTAGAGAATTATC 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGCAGCAGCTTCATGTAGAGAATTATC 2812
Query 1016 CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGAGGAGAGAAGATGGC 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGAGGAGAGAAGATGGC 2886
Query 1090 ATACAGGCGGAAGCATCAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAGTCTA 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ATACAGGCGGAAGCATCAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAGTCTA 2960
Query 1164 TTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAG 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAG 3034
Query 1238 ATTATTCCTGTGTTCCCCCCTGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATTCATGGTGCTATA 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 ATTATTCCTGTGTTCCCCCCTGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATTCATGGTGCTATA 3108
Query 1312 AATCCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGGGTATG 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 AATCCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGGGTATG 3174
