Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_024259.1
- Aligned Length:
- 2598
- Identities:
- 66
- Gaps:
- 2526
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTTTTCTTCGTAACTTCATGGCAACATGACCTACAGTTACTCATTTTTCAGGCCTGAGTTGATCGTTAATCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTAATTATGTTCATTCTGAAGCCAACAGGAGAACCAAGACCAAAACTTTATTGTCTCTGCTTTCATTTCTTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAACCTCTGGACTAAGCACACATCTTCCTTGTTTATCTCTCTCAAAGGAGTGTGGAGTGCTTCATCTGGACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCACGGGAAGAAGGAAGACATGAGGGAATGCTGGAAGAGGAGACAGGCCCCAGATTTGGGCAGGAAGTAAACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTTTTCAGGCTGAGGCCAATCTGAGCAGGAACATTCCAATATTTCTTCAGCTACGTTGTCCCAGCACTTCACTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTAACCTTTTATGTCCACCATTTGTGGATTTCACAGCTACTTGTCAATGGTGAATATTGATCATCATCATTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTACTGAGCTGCTACCATATCCCAGCTACTCCTTGCATGTTGTTCATTATTTTCTCAACACTCAGCATATTTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATATGTTATGTAATATCACAGACAAGGAAACTGAACGCAGAAATGTTTTATTTCTTGCCAAACATCACATGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGAACAATGAAACCGATTTGAAACCAGGATTGTCTGATTCCAACATCTCTGGGTCCTTTTTCACTCTGATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTGCAATTAAAAAGCCATTTCTAAGACTGTACGTTCCAAGATTGTTTCTATAGTTGGTTGTGAGAGAAGTTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTGAACTTGCAGAGCACGGGAAACCAGGAGGAGGAGGCTCAGGGTGCTCTCCACACGTGTGAAACCGGCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTGTTGCTTTCCTGTGACTGCCATTTGCCACTGATGATCTTCTCTTCCTCTGGAAGAGTAAGAGGGGGAAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACAGTTTCAGTGCTTCCCATTTATAATTAATTAATTAATTAAGGGCAGGTGCAGGGGCTCACACTTGTAACCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCACTTTAGGAGATTGAGCAAGGAGGATCCCCTGAGCCTGGGAGTTTGAGATCAGCCTGGGAAGCAGAGTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACCATGACTTAAATAAAAATTTTTTTGTGTTTTGTTCTAATTTTTACTTTTTTGAGACAGGGTCTCGCTCTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCCCAGGCTGGAGTGCAGTAGCGTGATCTCAGCTCACTGCAACCTCTGCCTCTGGGTTCAAACAATTCTCATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCTGCCACCATGCCCAACTAATTTTTTTGTACTTTTAGTAG 1258
Query 1 --ATGGGGTTTCTCCATGTCGGT----CAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC 68
|.|||.||||.||||||.||| |||||||||||.|||||||||||||||.|||||||||||||||||||
Sbjct 1259 AGACGGGTTTTCACCATGTTGGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCGCCCACCTCAGC 1332
Query 69 CTCC---------------------------------------------------------------------- 72
||||
Sbjct 1333 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCCGACCAAAAAAAAATTTTTTTTTTTCAATTAGCC 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 AGACATTGTGGCATGTGCCTGTAGTCGCAGCTACCATGGGGGCTGAGGTGGGAGGATAGCTTGAGCCCAGGAGT 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 TTGAAACCAGCCTGGGCAGCAAAGTGAGACCCTGCCTCAAAAATAAAAAATAAAAAAAAAGCTATTTCTTACAG 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 ATATTCATTGAGTGGAAAGCAATTTAATTTTACGTATAATAAGTTATTTCAAAAAGAATTGTAGTTATGTGTGG 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 CAATTTTTCATAAATACCTGATACAAATCAAGATCTACCATGGTAAGTGTGCTCCAGAGATACCCTTCTTGACC 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 AAAACAAAGCAGGGCAGGGATTGGGAGGCCTTTTGGGCTGGGCTCCAGGACACAATGACTAGAAGATGATGCAA 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 AGTGCATGACAGAGTAGAGAGCTACACAGTTTACACATATTAGACTCTGCACATATTAGAGTCTACACATATTA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 GACTCTGCAAAAGTAGTTCTTAAATGTTAGCTCACATGCACCCCAGTCACGTTACTGAGCAGATTCCTGGGCTC 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 CAGTCCTGGGTGATTCTTGCAGGTGGTCCATTGACCAGATTAGGAGAATCATCATCCAAGGTCTCAAAGCCAAA 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 TTTAGGACGCAGAGAGAAAGAATCCTAAGTGGTTGAATGGGAAACTGATTCTCCTCTTGAGCACACCTTAGATT 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 CAAATAATTGATTGGAGAAGATCATTCCATACAAAAATCTTCTGACCTGCAGAGTTTCTACAAAAAGTCTTGAG 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 AAAGAAAAAGAAAAACATATATTTTTGGAAAAGATTGAATTTAATTATAATTTTGCAAATTATACTGTGGGAAA 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 GGTCAACAAAAACAAGCGTATTGCGGATGATCTTATAAAAAGAACCTTTTGTAAAGTAAACAATTACCTTCTGA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 TTTGTCTACTCTGAACCCTTGATGTTTATTTAAATTGGATGTTCTCATAGCAGGACACACCTGATACCTGGCTT 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 GTCTAAACACTTAGAAAGTCAAATTGTCTAGTTATCAAAGCCCAGGCTTATTTTCTAAATAAGTATGGATGGTC 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 TTTCAGGAGTCATTTCACAGTGATGTGCAGAGAGAAAAACAATACAAACAAACAAACAAACAAACAAAAAACAA 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 ATCATTGTTCCTAAGTGTGTTTTCCAGCCTATGTCTAACTTTCTAGCAGATAATGGCAATAAAAATGTTTGGGT 2590
Query 73 -------- 72
Sbjct 2591 CCAACATT 2598
