Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_024561.1
- Aligned Length:
- 3681
- Identities:
- 65
- Gaps:
- 3609
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAATTGCTGCGGGGAGGACAGGCCAGCTCTGGAAGAAAACAGGTGGACCTGGGTCCCATTAACCTGGACAGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTCCAAGATGAGCATGAGGGGGCTGCTGGATCTGTTCTCCTTTCACAGCTGTATCCTGAAGAATGGCAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGGAAGAGCCACAGGATTCGGCAAAGACGGACACACAGAAATGGGTTCTCACTACGTTGCCCAGGCTGGTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAACTCCTAGACTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGCACTGGGATTACAGACATGAGCCACCGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCGGTCAGGTGCAGCCGTTGGGGACTGCAAAGCTGTTGATGCAGAAGGCCTAGTGCCTGGGGATGCCCACATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGTGTCTGCCACATTCAGGATGCCTGAGGTCCGGGAGCCAGGAAGGGTGAAGTAGTCCCTCTGTCGGCCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTTGAAGCCTGCCTGGGGGTGTCATTTGGAACAGGGTCAGCCCACCTGCGTCCTCACCCTCCCCAAGGACCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGAGGCCCCTGTGGGTTCCCCACTCACCTGGGCCGCAATGCCCCCCAGGCCGTGGTGGGGGCTCCCACCGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCACCCCCATGGTCCACTGGATGTCCTTGTGGTGAAACAGCACCCAGGAGGGGCCGCTGCCCAGGGCCAGCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCTGGAAGGTGTTCACCTGCAGGGCAAGCGCCAGGAGCCAGGGTGTCGTGGGCTGGTCCAGGGGCACCCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCCTCCTCACTGCCCAGTCCTCAACCGAGCTCCATCTGCACCACTAAGCTGGCTGCTTCCAGCTGTGCCACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTGGGCCCCCATCCACACCACATCCCGGGCCCCTACCCATGCCACATCCCAGACCCCCATCCACGCCACCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGGCCCCTGTCCACACCATGTCCACAGCTGCCTCTGCTGGCACCTGTGCCAGCCTTCCTTTCACATCCCCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCGATTTTTCTGCTCTGCTCTCATCCCCTCTCTCTCTCCGTCTCTCTCCTTTTCCTATTCTCTGTCTCTCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTGATCATCTCACTCCTCTCGCTTGCTGTCTTGCCTCCTCTCTCTCGCCATTTCTCTCCCTGTTCGTGTCTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCTTTCTCACCCATTTTCTCTACCTCGCTGCATCTCCATGCTTCCGTCTCTCTGTCTCTCTCTTCCCGCCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTATCTCTCCCTCGTTCCCCCATCTCCGTCTCTCCTCCGTGGTGTCTCCTCCTTACCCAGGAATCCAAGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCTTCCCAAGGGGTTGGGCCAAACAGCCTCAGCCTGGGCCCTTCTCTGCCACCCGCTTCCTCACCTGGGGACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGTGCCCCGTAAAATGGAATTTGGTCCCACATGGCCACCAGCAGGGCGCAAGGGGTGGGCGGGGCATGGGGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGCTGAGGCCAGGTCTCAGGCCACCTGCTGCGGCAGCTCTGGCTGGCGGCTCTGCCGGTACCACATCTGGCCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGCTCAGTGTGGACCCATTGGCCCAGAACGGGACTGCGAAGGCCTGGCCCATCTCCTGGGGAAATGCCTCCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTGAAGAGAGCCACAGGCTCCCCGAAGGACACCAGCCCATTGGTGCAGAACTGGGGGAAGTGAGGAAGGGCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACCCGCAGGGGGGTGTTGGCAGGGCAGGGGACAGAAGAGGGACAGGGCCCGCCCCAGGAAGACAGAGGACGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCAGAAGGAGCCAGGAGCTATAGATATAGACAGGCTCCGAGTCAAGAGTGGGGTGGGGAGAAGAGAGAGAGCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGGGACCGCACGGTCAGGGCCAGGGCACTCACATAGGCCGTCCCGTGTGTGGCTTCAAAGAGCATGAAGGGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAGCAGCCGCAGCTCCTCAGAGAAGTCATCATCCTCTGCAGGGAGGGCCTGATCCCCACACTCCAGCCCATAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGGTACAGGAGCGAGGCTGGGGACACGAGACCACTGAGGCTCCCCTCAGAGCCCCAGGGCAGGGCTGTGTCCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCAGTCCCCAAGAGAAAGCTCCAGGTCCCCTGAGGGACTCCAGGGTGGGGCCATGGCTCCTCAGACCCCTGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCTCCCTGCCTGTCCACATGGCCCTGTCCTCTCTCCAGGTTAGGGAGCACATCCATTCTCACCTCTGATCTCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGCTCCAAGTCACTTGGTTCTGTAGGACTGAGGGGAAGGATGTCAGCTAAGGGCTGGGGCCCACGTGGCACAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCGACCCCCTTCCAGAGTCCCCACTCCTACTCACCCACCAGCAGAAGCCACAGTATCCCCATGGTGGCTGCAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCTGCGGGCCAGGCGGGCTTATACCAGGGCAGAGGTGGGGCCAGGGTGGGGACGGGGCAGCTGGAGCTCACCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCATTGTTCGAGGGTCCAGGGGGCCTGGGGGTCTCCCAGGGATCCTGGTTCCCATCCGGTCTGCCTGAGGCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCCAGGTCTGGGGTTGGTGGGCAGGGCAAGGGAGGAAAGAGGGGATGGAAATCTTCCAGGGCTTTCCCAGGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCGGGTTGCCAGACCCTGGAGGAACCCCCCACCCATTAGCAGGGCTGGGCACAAGTCAAGCGATCCACAGTGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAAAGTTGAGCCACTGCTTGGTGAAGGGCCGCTGCTGACAGACAGCTGAACATGCAGGGAGCCTCTTCCCATGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGCCCTGCTGGTTCTCTTGGAGCAGGTTAGAGATGAGCACACAGCATCCAGGAACGGAGTGCATGTGCATCAAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGGGCCAAGATGTGTGGCTGGGGAGACTCGTGGGCTGCTGGCCAGCCCCGGGGGCCCAGGGGTGGGCATCTGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGGGCATGGCTGGGGCTGCCATGGTGGATAGTCAAGGTCAGGCATTTAGGAGTGTTACTGGACCCAGAAGGGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GATTCGCCTGGAGACGTGAACGGGGAGACGGGGAGGAGGAGCATACAGGCAAGGGGGCTCGTTACTGTGCACCT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTGAGATTCACGGACCACCCTGGTGGAGGAGGCTCAGAGTTAGGCACTGGGGACTCCATCTTCAAAGCAGTGTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCAAAGGGGTGCTCCAGACCCTCAAACCCCAGACAGCCCTTTACCTGGTCAAACCACATGGGACAGAGGGTCAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGTGTTCCTGGACCAAACTGAGGATTAGGCTGCTATTTCTCATGGCCCAGTGATGAGATGCAGATAAACTGGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGAACAGGGAGGTTTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTGAGACGGAGTCTCGCCCTATCGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCAGGCTGGAGTGCAATGGCACTGTCTCGGCTCACGGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC 3330
Query 1 ------------------------------------------------------------------------AT 2
|.
Sbjct 3331 TCAGCCTCCCAAGTAGTTGGGATTACCAACACCCACCACCATGCCTGGCTAATTTTTGTATTATTAGTAGAGAC 3404
Query 3 GGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---- 72
|||||||||||||||.|||||||||.||||.|||.||||||||||||||||||||||.|||||.||||||
Sbjct 3405 GGGGTTTCTCCATGTTGGTCAGGCTTGTCTCGAATTCCTGACCTCAGGTGATCCGCCTACCTCGGCCTCCCAAA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GTGCTGGGATTACAGGCATGAGCCACCGCACCCAGCGAAAAGGGAGTTTTTATTTCTGTAACTGGTTATAGGGT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GAAAGCCTGGAAATTGTCCCCAGACCAACTCAAAATTACAAAGTTTTCCAGAGCTTATATACCTTCTAAGCTAT 3626
Query 73 ------------------------------------------------------- 72
Sbjct 3627 ATGCCTGTGTGTAAGTGTAGTTTCTTCAGACCCCCAATTAAACTTGTTTAATCCT 3681
