Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_033702.2
- Aligned Length:
- 4862
- Identities:
- 46
- Gaps:
- 4813
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGACGTCCTCCCAAGATGGCGGAGACAGAGTGAAGAAACTGTGTTCCCCCCTTGGGTTGCTATCGATCAAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTAAAATTCCATTCTGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGGAAGCAGGTTTTCTCTGTGACTGTACCATAGTGATTGGGGAATTCCAGTTTAAAGCTCATAGGAATGTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCCTCCTTTATTGGAATGTTAAAGAAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGGTCACTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGCAAAATAAAGATGGAAGATTTTGCTTTTATTGCTAATCCTTCTTCTACAGAGATATCTAGTATTACTGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACATTGAATTGAATCAACAGACTTGTCTTCTTACTCTGCGAGATTATAATAATCGAGAGAAATCAGAAGTATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAGATTTGATTCAGGCAAATCCTAAACAAGGCGCGTTAGCGAAAAAGTCATCTCAAACGAAAAAGAAGAAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCTTTCAACTCCCCGAAAACAGGGCAGAATAAAACAGTGCAATATCCCAGTGACATCTTAGAGAATGCATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTGAATTATTCCTAGATGCAAATAAACTGCCCACACCTGTAGTAGAACAAGTTGCACAAATAAATGATAATTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAACTCGAGTTGACATCAGTTGTGGAAAATACTTTTCCAGCACAAGATATTGTGCACACTGTTACAGTGAAAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAAACGTGGAAAATCACAGCCAAACTGTGCTCTGAAAGAACACTCTATGTCTAATATAGCCAGCGTCAAGAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTATGAGGCGGAGAACTCCGGGGAAGAGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGTGTAACACATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGGAAAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACATGAGAATACATAAAGGAGTCAAACCTTACGTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCACTTATGTGGAAAGGCATTTACCCAATGTAACCAGCTGAAAACGCATGTAAGAACTCATACAGGTGAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCATACAAATGTGAATTGTGTGATAAAGGATTTGCTCAGAAATGTCAGCTAGTCTTCCATAGTCGCATGCATCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGTGAAGAAAAACCCTATAAATGTGATGTATGCAACTTACAGTTTGCAACTTCTAGCAATCTCAAGATTCATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAAGGAAGCATAGTGGAGAGAAGCCATATGTCTGTGATAGGTGTGGACAGAGATTTGCTCAAGCCAGCACACTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCTATCATGTCCGTAGGCATACTGGAGAAAAGCCTTATGTATGTGATACCTGTGGGAAGGCATTTGCTGTCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAGTTCTCTTATCACTCATTCTCGAAAACATACAGGTGAAAAACCATACATATGTGGTATTTGTGGGAAAAGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTATTTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCATACAGGAGAAAGACCATTTATCTGCGAATTATGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAAATTCTTACACAGATATTAAAAATTTAAAGAAGCACAAAACAAAAGTCCATTCTGGTGCAGATAAAACTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGACTCCAGTGCAGAGGATCATACTTTGAGTGAACAGGATTCCATACAAAAAAGTCCTTTATCAGAAACTATGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGTGAAGCCTTCTGATATGACTTTACCATTAGCTCTTCCACTTGGGACTGAGGACCATCACATGCTTCTGCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTCACGGATACTCAGTCTCCTACATCAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATTTTTTTACAACAATTATACTGACTTTGTAAGGAATATGGAATTGCTAAGATATCATTGGTAGCAAACATCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGGTAAGGTGCATATATTCATATTAAATTCCCATTCATTTGAGTTGTGACCATTATTTTTCATTCACTGAAGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAGCACCTGATGCTGCATCACAACTGCAATGTTTGTTTTTATTTTTGGCTTTATGTCTATACTCCACAGAGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTTTTTAAGTAATGAATTATGTAGCACTATTTTGGGTGGATGAGTTTTATTTTCTTTTAAAGCTGCCTTAATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCATTTTTATTTTGCATTTTAGAATTGCCCTTCATTTACTAAATCAGCCAGTTAATGTGATTCAGTTGTGACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGGGATTTTAAAATTTTCCTGCCCTCATAATTTAAGCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TATTTGTAAGCCCCATGGATCAATACATAAACTATGCATAAAAATAAAATTTCATATTTTCGCTCGTAAAAATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAGGCGCTGAATAAGAATTGTGCTATTTCTCTATTAATATATTGTTAGAAATAACTTTTCTAATGAAACAAAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTTTCTCAAAATCTAGAAAAGTGCATATAAATTTTTGTTCATTTAGAACTGAGTATTCTGGAGAAAACCAATG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTCAGCACTTTTGGTTTGAGTTATCTGAGATTGTATTTTCAAAATGAATTTTAAGTAGATATTTGGTGTTTTTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCTTGTCAAAGACAGTTTCAAAATTTGATTCAGTTTATGTTTTATTCCGTTCTAAAATATTGGAGATGAGGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGTACTTGAGTTTTGAAATATTTTGGTAAGCCTCTCTTACTCCTGTTATGCACTTTTTAAAATAAATACTGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCCAGAAAGAATTTTCTAGATATAAACTTAATGCATACTAGAAATCACTTGGCTTCTAAATTTGGTACATTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTGCATAAAGAGTTAAGAAATTAACCTCAATTATAAGTAAACATTTTGAGTTACCAGAAAGCCAACTATAGTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAATATTTTATATCTGAGTTTTCTATAAGTTTGGGGTTTGTTAATTTTATAAATTAAACCACAACTTTTGGTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGTTGTAGTTTCACAATGGTCCTTTTCCTTCCAAATGAATGTAGAAAATTCGTTATTATCCTGATATTTGCAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CACTCATCCCCATGCCACTTTTCCCACATATTAATTTATTTCACTGCCTGATCTTTGGATATGAAATTATGAGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCACAAAGTCAATTTTTATAGTGCCAATCAAACAGCATGGTGATATTCTTTTTCTTTTTTTTTCCCCCCACAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGCTGTTGTTCAGTGTGAGATGACATCATTTCTTATTTCTGCCATGCTGTGGCTTTTTTGTGTTCTGCTTTTAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ACTACACCTGTAGTACAGTTAATATGTTTTTTATTGGTATTGATTTCTTTAATTCATTAATTTTCTCTATTTGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GACCCAAGTCATAAGAACCAATTAGAGGACATAATAAAAACACTTAATGCTTGTAGTCTGTAGAGATCTTCACC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATTTCACAGCACACACATTATTTTCATAATAAATTGCCACTGGTGGGACATGGGACTGACTTATTTGAATAGAG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTTGAAATACCACCTTTGTATGATGCAAACAATATTTGATTATTTTATCTAAGAAATCTATGCATGTGTATCAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GTTAAAATAGTGGGTTTAAATACAATTTACAAAGCATTAGAATGTTACCTAATCTCTTCTGGGTTAAATGTGAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGAATGTATTGGAATGTGAAGAAATTATAGAAAATTAAAAGACTCAGCCTCTTTAGGAAGTTTGCTAAAATGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGAGGTTATGTTTAATTTATTTATATCTTCGTTAATCCAAGCATCTAATGAACAAAAAACTGCTACAGTGACGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CATAATTCTATAAGGGCAATAGTTGCCAAATTTCCTCTGGTATTATTAGCATTCTGCCTTTGCATAGATTAGCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TTCAAATTTATTATTTTTAGTATTATTTGATACGATTGAAGTGGCTAAGATTGATTGAGCTTTTCTTGATCACA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTTTCTGCTTCTTAGCTAAAGTAATTTTATTTAAATTGACATGGCTTGAGTTGTCATCATTTTCTGCTCTTCTA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GAATGATGTGTAGAGAAAACTTGAAGATACTATCCCTTCTTTGGCATTCTTCTCTTAATGCTATGCTATTATTT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATCATAATATGCATATATTTAGTTGTATCTGGTATCATTCTAACACTCATAACTACCATTTTAGTTAAGTCCAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTTTATATTTGTTACAATGCAGTGTTTTGGGAAAGGTCTATTAGTAATTATTTAAGTATTACATATTTTTATGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AAGTCTTTAGAAGGTGAAGATCTTACTGAGAAACTATTTTCTAAATAAATTTAATTTTCTTTTGTATTTGTATC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AGATCATGCCTACTGTATGTTAGATTTTAGACTATTTTAAAAGAAACCGTAGATTATATAAAAATTTTTTTGCT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GTTTTTAAATGGCATTTGTCTTATGTTTAATTTCACAGGATGATTTTGATAGACAAATTTTAGAAAACCTTTTT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TCAAAGGTAATGGTTCTATCAGTTTCATTCCAACAGTAGCTAATTTCTGTGTTTCAGTCCTACAGAAATTGTGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GAGTAGTTGAAATAATGTACATGTACTAGTTTTTTTAAGTATTCTAAATAGTTCTAACATTTAATGCATATCAG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAACATGCTTAAGAAATAACAATATCCAGGCCCACCCCACCTATTGAATCAGACAGTTCCCAGGGCATATATAT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCTGGGGAAGCCCCATAGGTGATTTTAATGTATACCAAACATGTAGAGTCTCACTCTGTTGCCCAGGCTGGAGT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GCAATGACGTGATCTCAGCTAACTGCAACCTCTGCCTCCTGGATTCAAGCAATTCTCCGGCCTCAGCCTCCTGA 4736
Query 1 ----------------------------------------------------ATGGGGTTTC--TCCATGTCGG 20
|||||||||| || |||.||
Sbjct 4737 GTAGCTGGTACTACAGGTGCGCGCCACCACACCTGACTAATTTTTGTTAGAGATGGGGTTTCATTC--TGTTGG 4808
Query 21 TCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC 72
.|||||||||||.||||||||||||||||||
Sbjct 4809 CCAGGCTGGTCTCGAACTCCTGACCTCAGGT--------------------- 4839
