Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_033702.2
Aligned Length:
4862
Identities:
46
Gaps:
4813

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTGACGTCCTCCCAAGATGGCGGAGACAGAGTGAAGAAACTGTGTTCCCCCCTTGGGTTGCTATCGATCAAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTAAAATTCCATTCTGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGGAAGCAGGTTTTCTCTGTGACTGTACCATAGTGATTGGGGAATTCCAGTTTAAAGCTCATAGGAATGTGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGCCTCCTTTATTGGAATGTTAAAGAAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGGTCACTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATGCAAAATAAAGATGGAAGATTTTGCTTTTATTGCTAATCCTTCTTCTACAGAGATATCTAGTATTACTGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AACATTGAATTGAATCAACAGACTTGTCTTCTTACTCTGCGAGATTATAATAATCGAGAGAAATCAGAAGTATC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACAGATTTGATTCAGGCAAATCCTAAACAAGGCGCGTTAGCGAAAAAGTCATCTCAAACGAAAAAGAAGAAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGCTTTCAACTCCCCGAAAACAGGGCAGAATAAAACAGTGCAATATCCCAGTGACATCTTAGAGAATGCATCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTTGAATTATTCCTAGATGCAAATAAACTGCCCACACCTGTAGTAGAACAAGTTGCACAAATAAATGATAATTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGAACTCGAGTTGACATCAGTTGTGGAAAATACTTTTCCAGCACAAGATATTGTGCACACTGTTACAGTGAAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAAACGTGGAAAATCACAGCCAAACTGTGCTCTGAAAGAACACTCTATGTCTAATATAGCCAGCGTCAAGAGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTTATGAGGCGGAGAACTCCGGGGAAGAGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGTGTAACACATG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGGGAAAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACATGAGAATACATAAAGGAGTCAAACCTTACGTCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCCACTTATGTGGAAAGGCATTTACCCAATGTAACCAGCTGAAAACGCATGTAAGAACTCATACAGGTGAGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCATACAAATGTGAATTGTGTGATAAAGGATTTGCTCAGAAATGTCAGCTAGTCTTCCATAGTCGCATGCATCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGGTGAAGAAAAACCCTATAAATGTGATGTATGCAACTTACAGTTTGCAACTTCTAGCAATCTCAAGATTCATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAAGGAAGCATAGTGGAGAGAAGCCATATGTCTGTGATAGGTGTGGACAGAGATTTGCTCAAGCCAGCACACTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACCTATCATGTCCGTAGGCATACTGGAGAAAAGCCTTATGTATGTGATACCTGTGGGAAGGCATTTGCTGTCTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TAGTTCTCTTATCACTCATTCTCGAAAACATACAGGTGAAAAACCATACATATGTGGTATTTGTGGGAAAAGTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTATTTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCATACAGGAGAAAGACCATTTATCTGCGAATTATGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGAAATTCTTACACAGATATTAAAAATTTAAAGAAGCACAAAACAAAAGTCCATTCTGGTGCAGATAAAACTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGACTCCAGTGCAGAGGATCATACTTTGAGTGAACAGGATTCCATACAAAAAAGTCCTTTATCAGAAACTATGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGTGAAGCCTTCTGATATGACTTTACCATTAGCTCTTCCACTTGGGACTGAGGACCATCACATGCTTCTGCCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTCACGGATACTCAGTCTCCTACATCAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GATTTTTTTACAACAATTATACTGACTTTGTAAGGAATATGGAATTGCTAAGATATCATTGGTAGCAAACATCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTGGTAAGGTGCATATATTCATATTAAATTCCCATTCATTTGAGTTGTGACCATTATTTTTCATTCACTGAAGT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAAGCACCTGATGCTGCATCACAACTGCAATGTTTGTTTTTATTTTTGGCTTTATGTCTATACTCCACAGAGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCTTTTTAAGTAATGAATTATGTAGCACTATTTTGGGTGGATGAGTTTTATTTTCTTTTAAAGCTGCCTTAATT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCATTTTTATTTTGCATTTTAGAATTGCCCTTCATTTACTAAATCAGCCAGTTAATGTGATTCAGTTGTGACCT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTGGGATTTTAAAATTTTCCTGCCCTCATAATTTAAGCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTTGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TATTTGTAAGCCCCATGGATCAATACATAAACTATGCATAAAAATAAAATTTCATATTTTCGCTCGTAAAAATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TAGGCGCTGAATAAGAATTGTGCTATTTCTCTATTAATATATTGTTAGAAATAACTTTTCTAATGAAACAAAAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTTTCTCAAAATCTAGAAAAGTGCATATAAATTTTTGTTCATTTAGAACTGAGTATTCTGGAGAAAACCAATG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTCAGCACTTTTGGTTTGAGTTATCTGAGATTGTATTTTCAAAATGAATTTTAAGTAGATATTTGGTGTTTTTA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCTTGTCAAAGACAGTTTCAAAATTTGATTCAGTTTATGTTTTATTCCGTTCTAAAATATTGGAGATGAGGAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATGTACTTGAGTTTTGAAATATTTTGGTAAGCCTCTCTTACTCCTGTTATGCACTTTTTAAAATAAATACTGAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTCCAGAAAGAATTTTCTAGATATAAACTTAATGCATACTAGAAATCACTTGGCTTCTAAATTTGGTACATTAT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ATTGCATAAAGAGTTAAGAAATTAACCTCAATTATAAGTAAACATTTTGAGTTACCAGAAAGCCAACTATAGTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AAATATTTTATATCTGAGTTTTCTATAAGTTTGGGGTTTGTTAATTTTATAAATTAAACCACAACTTTTGGTGG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGGTTGTAGTTTCACAATGGTCCTTTTCCTTCCAAATGAATGTAGAAAATTCGTTATTATCCTGATATTTGCAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CACTCATCCCCATGCCACTTTTCCCACATATTAATTTATTTCACTGCCTGATCTTTGGATATGAAATTATGAGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TCCACAAAGTCAATTTTTATAGTGCCAATCAAACAGCATGGTGATATTCTTTTTCTTTTTTTTTCCCCCCACAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGCTGTTGTTCAGTGTGAGATGACATCATTTCTTATTTCTGCCATGCTGTGGCTTTTTTGTGTTCTGCTTTTAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ACTACACCTGTAGTACAGTTAATATGTTTTTTATTGGTATTGATTTCTTTAATTCATTAATTTTCTCTATTTGG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GACCCAAGTCATAAGAACCAATTAGAGGACATAATAAAAACACTTAATGCTTGTAGTCTGTAGAGATCTTCACC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ATTTCACAGCACACACATTATTTTCATAATAAATTGCCACTGGTGGGACATGGGACTGACTTATTTGAATAGAG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TTTGAAATACCACCTTTGTATGATGCAAACAATATTTGATTATTTTATCTAAGAAATCTATGCATGTGTATCAA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GTTAAAATAGTGGGTTTAAATACAATTTACAAAGCATTAGAATGTTACCTAATCTCTTCTGGGTTAAATGTGAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AGGAATGTATTGGAATGTGAAGAAATTATAGAAAATTAAAAGACTCAGCCTCTTTAGGAAGTTTGCTAAAATGG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AGAGGTTATGTTTAATTTATTTATATCTTCGTTAATCCAAGCATCTAATGAACAAAAAACTGCTACAGTGACGT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CATAATTCTATAAGGGCAATAGTTGCCAAATTTCCTCTGGTATTATTAGCATTCTGCCTTTGCATAGATTAGCC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTCAAATTTATTATTTTTAGTATTATTTGATACGATTGAAGTGGCTAAGATTGATTGAGCTTTTCTTGATCACA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TTTTCTGCTTCTTAGCTAAAGTAATTTTATTTAAATTGACATGGCTTGAGTTGTCATCATTTTCTGCTCTTCTA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  GAATGATGTGTAGAGAAAACTTGAAGATACTATCCCTTCTTTGGCATTCTTCTCTTAATGCTATGCTATTATTT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  ATCATAATATGCATATATTTAGTTGTATCTGGTATCATTCTAACACTCATAACTACCATTTTAGTTAAGTCCAA  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  CTTTATATTTGTTACAATGCAGTGTTTTGGGAAAGGTCTATTAGTAATTATTTAAGTATTACATATTTTTATGG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  AAGTCTTTAGAAGGTGAAGATCTTACTGAGAAACTATTTTCTAAATAAATTTAATTTTCTTTTGTATTTGTATC  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  AGATCATGCCTACTGTATGTTAGATTTTAGACTATTTTAAAAGAAACCGTAGATTATATAAAAATTTTTTTGCT  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  GTTTTTAAATGGCATTTGTCTTATGTTTAATTTCACAGGATGATTTTGATAGACAAATTTTAGAAAACCTTTTT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TCAAAGGTAATGGTTCTATCAGTTTCATTCCAACAGTAGCTAATTTCTGTGTTTCAGTCCTACAGAAATTGTGT  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  GAGTAGTTGAAATAATGTACATGTACTAGTTTTTTTAAGTATTCTAAATAGTTCTAACATTTAATGCATATCAG  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  AAACATGCTTAAGAAATAACAATATCCAGGCCCACCCCACCTATTGAATCAGACAGTTCCCAGGGCATATATAT  4588

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4589  GCTGGGGAAGCCCCATAGGTGATTTTAATGTATACCAAACATGTAGAGTCTCACTCTGTTGCCCAGGCTGGAGT  4662

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4663  GCAATGACGTGATCTCAGCTAACTGCAACCTCTGCCTCCTGGATTCAAGCAATTCTCCGGCCTCAGCCTCCTGA  4736

Query    1  ----------------------------------------------------ATGGGGTTTC--TCCATGTCGG  20
                                                                ||||||||||  ||  |||.||
Sbjct 4737  GTAGCTGGTACTACAGGTGCGCGCCACCACACCTGACTAATTTTTGTTAGAGATGGGGTTTCATTC--TGTTGG  4808

Query   21  TCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC  72
            .|||||||||||.||||||||||||||||||                     
Sbjct 4809  CCAGGCTGGTCTCGAACTCCTGACCTCAGGT---------------------  4839

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