Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_038444.1
- Aligned Length:
- 4262
- Identities:
- 68
- Gaps:
- 4190
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACTCTGGCCGCGGCGATTCAATATATCCGGAAGCAACTGTCATGGCTGCTGTCAGTGAGGGCCCGTAATGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCGAGTCAAGGGTTGCCCAGGGACACTTAAGAGCCTTCGGCTTCAAGGAGGCCTCTCAAAGGACAAAGGATGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTGCCTGGCGGCAGAGTGCCCCCCACAATCGTAGGAACTGTGTCGCCGCGCTTCCCGTTAACTTGCCGCTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTTTCTAGAAAAGTCGCCCTTCTTGCCAGGGGTGTCCTATAGACTTTGTCATGGAGTGAAACAGAAACAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACTTCACTGCAGGAGACAGAGTGGATTCATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTATTCTCCATGTAGACTTCCATCTTCATGAGTACTCCAAGAAGATGGTTCAGTTGACTATTGCAAAGGATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCATGGGTCCCTGAGAATTTCATTACTTGCAACCTGAATGGAAAAATCACTTGAAAGCATCATGTGTGAACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTGGATACAAAAGAGATCAATAGAGTTGGCCTGGAACAAGAGATGCCCTTGAATGCAAGTTGTAACAACTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGAAATTGCCCAGACACTGCAACGGGAGTTGCCAACAAAGTAACAGAGTCAGAGAAGAGCTGAGTCTTGGGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAAAAAGTGATGAGGGGATGACTTCCACAGTGGGTATCCGGTCATTTGGGCTGCTGCTCTGCCCTCATCAAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATTTCCACTCTAAGCCTTTGCTAATTTCACAACAGGAAAGCATGCAAGAAATTCGAGAACAAAACAAATCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACGCAGAGCCCAGCATCTTCAAGCAAACACCCTGAGGTACAGACCCGAGGCTAGATGAGTCCGGACTGCAGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGCAGCTGCCTCTTAAACTGCAAGGGGACTGAAAAAGTCATTTGCCTCTAAAAAAACCAACTCTGAATACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTGATAATGAATATTCATGAGCCCCTCCAGCTTGCTCTAGAGCCACCCTTGACTGCAACCCTGGACTCTGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTAAAAAGTTTCCCAAAGCTCTTTCTCTGCCTCCTCTCAGAAGGAAGAGGGTGGGAAAGTTCATTCAGGGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGCCTCCAGCTTTCAAGTACTTGCTTTTTGGTCTGGGCTTTTATTTTTCCTTCTATTTTTTTTTTCTTAAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTCAGATCAAATCAATTTTGGTCTTACCCTTTGTATCTTCCATAAGTAGCAGCTTTTGTTTTCCTCCTCTTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCGTCTTTCCCCCCCCCAGCCTCTGCTTGCTGTGGTCCGTCTCCGTGAGAGAGGTCCTCAAGGAAACAGAGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATAACAGACCCTTGGGCTCGTGGGAGGGGCTAAATTAGCCGGCCCCGTTTCGGAAGGAACCTCAAACCCTGTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTCATTGACTAGAAAGGACAGATTGACTGAGGAGTCCAGCAGCTCATTTTCCTAAAGTTACTCGAAGCCTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCAGGTTGTAATTTTTTGCATCCTTGAAGCAATGTATATTCAAATCTCTCTCTCTTTCTCCCTTCTTCCCTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCCCTTACTCCCTCCCTCTTCATCTCTCTCTCCCTCTCTTCGTTATAGAAATCCCTTTTTCTCCCTTGAAAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTCATCTCAGCTGCAAGCAAAAAAAGCTATTCCTTACTGCAATTATGAAGCTAGATAATAAGAAAGTTGTTACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGAAACCCGCTCGAAAAACTGAAAGTCAAGAACAGTTCTTCCCTCCCCATAAAGCCTCTGGTCCCATGACCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAATCCTTTCTCAAGGCTCATTAGAGCAAAGAGCAACAGGTGACCCAAGCGATGAGTTTCCTGCAGGAGACGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCGTTATTGGTTGGAAGGCTGGGTGGAACCACAGAGGAGCTGCTCAATGGGAACCGCTGCCTGGCTATGAATTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGAAAGTCATCCACCATTTCCCAACTTTGACTTCCTACCTTTGAAGTCTAATGAGCATGAATTACCACATCCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GACCGTCAAGATTACCCCAATGTAGATGAGAGCCTGACCAAATTATTTTTAAACTGTGTAACAAAATTATTTTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAATCAAAACAAGGGCTAATCCTTTGAAAGGAAGGTAAGTCCTCAAGTCCCAAGGCGACTTGGCAGCTTCTCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCACAAGGCTGTTGCAAACCTTAGCATTTCAGGTCTGAAAGATACCTCAGACATTGAGTCTAAAAGAGGTTAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGATGTGGAGAGGTTAAGCCACCTGCTCATGCTCACATACATGGTCTCTCTTATTTGCTACCATGTTCCCCAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCTAATACAGTTTCTCTCACAGCATGGGCTCTCAATAAATATTTGATGAATGGTTGAAAAAAATGAATGAATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCAGCAAAGCAGAAATGTAGATCTGTTTTCCTGTTTCCTAGTTCTTGATTTTTCTACATTGCTTGTCTGGCATG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAAATTTGTATCTAAAGCCAGTTATACCATATAAATCATTAAATTTGTGAGCCCGAAGGACTGTTTTGACTCTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTAGAAACTATATTCTCCAGCGAGCTTTCAGTCATACTTTAATAAGGACAAAGGATAACCTTTTAGTTTAGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATCTCTGTTACTTTGCACGGTGCCACATGGTATATACTCAATACATTTTTTATACTTTAATAAATTTGGAGCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTAACAATACTTTATTTCTGAAATGCTTTATAGTTATAGGATTTTGCATGTATGATAACAACTAATTACACTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AATGAAAGACTCAATGGATGTCTTCTCCCGAGTCAGTTTAGACTACATCTCTAATAATGAATATTGGTCTGATA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTCATCCTGTTATGATAAAACTGGTTTTTGGTGATATGATGGGATTTTTTGTAAAAACCAACAATTGGTTTATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTGCCTTTGTACTATTGTTTTGGAGAGAAATTTGAAAAGAGCATGTCCACAAAATAGTGTGCGAATTACAGAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGGAAACCAAAACATCAAAGCTAGAAAGAGAAAAGAATGATCAAAGGGAAGATCCAGAGTGGCTGAGGGGTAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAGGAGAAACAGACAAACAAGTACCTGAGCTTGTCAATGAGAGACACACTTTGGTGGGTGCTGTGGCAACGGTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTCTACTTTATTACATTAGGATATTAGGTTCTTTTTTTTTTTTTTTTTTTGAGACAAGAGTTTTACTCTTGTCT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CCCAGGCTGGAGTGCAATGGAGCCATCTCAGCTTACTGCACCCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGC 3256
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 3257 CTCTGCCTCCAAGTAGCTGGGATTACAGGCGCCCGCCACCTTGCCCAGCTAATTTGTGTATTTTTAGTAGAGAT 3330
Query 3 GGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---- 72
||||||||.||||||.||||||||||||||.|||||||||||||||||||||||||||.|||||||||||
Sbjct 3331 GGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCCCAAA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTATTTTACTACGTTCTTACATTCTTTTTTTTGAGACA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GAGCCTCACTCTGTCATCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CAAGTGATTCTTGTGCCTCAGCCTCCCGCGTAACTGGGATTATAGATGCGCACCACTAAGCCTGGCTAATTTTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GTATTTTTAGTAGAGATTGGGTTTCACCATGTTGTCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCGCT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACAGTGCCTAGCCACAGTTCTCTATTTTAAACA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAATTAAAATTCAAGGTCACTTCAGTCATGTTGTATCAGACGTTGTCGACAAAAGGTTACTTTGACAATTGTCT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CATTCTCTTTACATTTCATCAGGGAGAGAAAGAGTTAGTAAAAAGTAAATTGTTCTAGTACCCAACTTCTGGTT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TAACCAGGAGAGGTAAAATCTCATTATAGTAACTAGCACTTCATAAATATTTGAAGTTCATCCAAACTGAATAT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 GGAGTAATAGAAACATAGTTTTAACCCCTAATTCATATTACATGAGCCTTTTGACAACATTTAATGCTTTTTAT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GGTAATATGCTCTGTGCTACAATTTAATCACGTTGTCCAGGTTCGCACCCTCCTCAGCATCATGAAAATACTAT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGTTAAGTATATATTATCACCAATTCATACAAGAATAATTATAAAAGAGATGGGAGTTTGTGTGTATCTTTCTA 4218
Query 73 -------------------------------------------- 72
Sbjct 4219 AAGGCCTCAGAATTTATCTTAAAAAATAAATCGTCTTTCTCAAC 4262
