Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_040071.1
- Aligned Length:
- 3189
- Identities:
- 64
- Gaps:
- 3117
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGTGGGGAAATGGTCAAAGAGCGATGGGCCCAGAAAAGGGTCAGACCCAGATGGAGATGCCACTGGCTGCTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGACCCCCACGCTGGGTCTAGCCCACCCAATCCCATGGGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACAGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGGGCCTCAGCAAGTAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCTTCAGGTGCGAGTGCTGCTGGGTGAAGCTGCGTGGGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCAGAAAGTGACGTGACAGTCCACAGGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAACCATCACGGTCCCTCTCTGGCTGGGGACGTGCGCCTGCCACTGCTGGCTTGCCAGCATGATCATTGGTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGACCTGTTGAGCCCATCTTGCCAGCCTCACAAAGGACAGTACTAGCTGCTTATGACAGGAAAGTGGAAGAACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCCTGGATATTTCTGGAGAATTACCGTGTGTGCTAGTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGTGATCTCATCGAGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCTACAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGATTTCACCTAAAGATCATCCTTGAGAATGTGGGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCGAGGTGTCCCAGAGAGGGAATTCTGCCTTGAGACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCCACGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCTGTCTCCGGACCCACCGTGTGGCCCCAGACCCTCCAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGGAGGCCTGGGCTTCAGTGTGTCCCTGGGTGCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGGGCATGTTCTGTGACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGCAGCCTAAGATCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAAACTGTTGTTCGAGTGGATGGGAACTTGATGCTATTTTCAGGCTGAATGACAAGACTCCGCGATGCTTCTCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTGGGCTGCACAACGGAATCTACCAGGGAGGTTTTAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTAATTGCAGCTGCTCCAGAGGCTGAGGCGGAGGATTGCTTGAGCCCAAGAGTTTCGGTTTATTTGCTTTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGAGTCTTGCTCTTGCCCAGGCTGGAGTGCAGTTCCATGATCTCGGCTCACTGCCTCAGCCTCCCAAGTAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGATTACAGGTGCATACAACCAGGCCTGGCTGATCTTCGTATTTTTAGTAGAGATGGGGTTTCACCATGATGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCAGGCTGGTCAAGATCTCCTGACCTCAAGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGAACCACAACACCTGCCGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACAAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAAAAACACTGGTGCCTGAGGCCCACCCCGAGAGATTCTGATTGAGTTGATTTGGATTTGAATTATCTTTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATTTTGGATGTGAATTTTTTTTTTTTTTCTTGGAATGGAGTTTCACTCTTGTTCCCCAGGCTGGAGTGCAACGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACGATCTTGGCTCACCGCAACCTCCGCCTACTGGGTTCAAGCCATTCTCCTGCCTCAGCTTCCCAAGTAGCTG 1850
Query 1 ----------------------------------------------------ATGGGGTTTCTCCATGTCGGTC 22
|..||||||||||||||.|.||
Sbjct 1851 GGATTACAGGCATGTGCTACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGCTC 1924
Query 23 AGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------ 72
||||||||||.|||||||||||||||||||||||||||.||||.|.||||
Sbjct 1925 AGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGACTCCCAAAGTGCTGGGATTACAGGCATG 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 AGCCACCATGCCTGGCCGGATGTGAATTATCTTAAAAATTTTCAGGTAATTCTAATGGGCCAAGGTTGAGAACC 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 CCTGCTCTGGGCCCATCCGAGCACCAGGCTGTCACAAACGCATGCATGCACTCACGCCCGTGGGCTTGGGGGGC 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TTCGGAAATGTGCTTCTGCTTTTTTGAGATGGGGTCTTTCTGTTGCCCATCCCGGAGCACAGTGGCACGATCAC 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 AGCTCACTGCAGCCTCGACCTCCTGGGCTCAGGTGATCCTCCCGCCTCAGCCTCCTGAGTGTCTGCTTCTGGTT 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 TTCATGATGACCTGGGGCCCAGGCATACTACACTTGTGCTGTTCAGGGGCCAGTCCTGCACCAGGAGCCCATCA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 GCCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCACGTGGATCCTGCGTAGGTTT 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 TCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCTCTGTTTTCCCTC 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 TTCACTGAACACTCAGTCGGGGCTCGCCATGATGCCTCTGTGTCTGCTGGCTTCTCCCCCATTGGAACAGCCTT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CTTGGCACGCCACACTGCTAGCTGCTGGGCACTGTGCTTTCTGCCTTTACCGTTCTGCCGTGATGTTGCCAAAA 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TAGCAGCAACAACAACAACAACAAAGGCTGGGCACCTGGCTCATGCCTGTATTCCCAGCAGTTCGAGATCAGCC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GCATCTTCTTGCTGCCGTCCCAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GCTGGAAAGCTTGGCTGTGCCTCTCGATGATGATTAAGATTTCAATATTTACAGCAAAACCACAAAGCAAATGA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TAGAATAAAGCAAAACAATGGAAAATCTGAGTTCACTCGTGAGAGAGGTACGTATGTGAGCTCTGAGGAAATTA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGAA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 AAATGAAAAACACATTACTTTGAACAGCCAAGAAAAAAATTGCAATTTATTAAGATTCAATAAAGCGTTGTACT 3182
Query 73 ------- 72
Sbjct 3183 TTCGAAA 3189
