Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_040250.1
Aligned Length:
1701
Identities:
63
Gaps:
1630

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGGGTAAGAGGAGACGGGTGCCCCCCACCCACTCCTCCCGGCCGCGCGGACCTCTCCCGCTCAGACCTGCATC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCATTCCTTTGAGTTTACCACGGACTTGGGGCGGGATCAAAGGGAAAGTGGCCTGAGCCTGTTTCATCAAGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTGTGGACCGAAACCAAGGCCGGGGGTGGCGGAGGGCACGCGGATGAGGGGCTCAGGCCTAGGAAGGGCCGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCTGGACACCGCGCCCTCCCCTGCAGCCAGGCGCCGAGGCCTGCAGCACCCGGAGCGCCGCACTGACCCGCGAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTGCCCGAAGGCCGGCCCGGGTGCGCCCCGGCGCGGGGAGACACCAACAAGGCCAGCTTTTCCACGAGAGGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTTAGCTCTTGTGACCATATTTGGTCTGGCGAGGAGGCATCTTGGCTGCCTGGCTCTCAATTGTCTGCTAGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACAGACGGTGCCCAGAAAGTGCCTCTGTCACTGGAGATGCGGCTTCGCCAACGGGCTTGAGTGCAATAGCTCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCTGCCTCCCAAGTAGCTAGGAT  592

Query    1  ----------------------------------------------------ATGGGGTTTCTCCATGTCGGTC  22
                                                                ||||||||||.||||||.||.|
Sbjct  593  TAAGACGCCTGCCACCACGCCCAGCTAATTTTTGTATTTTTTAAAAGCAAAAATGGGGTTTCACCATGTTGGCC  666

Query   23  AGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------  72
            |||||||||| .||.|||||||.|||||||||||||||.||||||.||||                        
Sbjct  667  AGGCTGGTCT-CAAATCCTGACTTCAGGTGATCCGCCCGCCTCAGGCTCCCAAAGTGCTGGGATTACAGGCATG  739

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  740  AGCCACCGCGCCCAGCCTGCCTTAATATTTTTACAGGGTAAAATAAAGTCGAAGTTAAAATCTGGAGCTGCCTT  813

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  814  GGAGGAGAAAAGTTTAAGGAAAAGACAAGGCCACTCATAGTTTTGCCTCGGAAAAGGTAGAATTTTGGGGCCAC  887

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  888  TCCCTGAATGGCTGCATCCATATCCAAAACAGAACCACCAAAGTGAGCCACTTCCCCTGTTATCTGTACTTGGA  961

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  962  GGTGGCTCCAATTCCAGACTCCTCATAGACTGGAAGAAATTAGGGCCATCTTAGACTAAGGCAGGCATACACGT  1035

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1036  ATCATCCTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTATTGCCCAGGATGGAGTGCAGTGGCATGATCGC  1109

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1110  GGCTCACTGCAACCTCTGCCTCCCTGGTTCAAGCAATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGATTCTGT  1183

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1184  GCAGCAAGTCCTCTGCCCATAGGACTGGCAAAAGGAAAGGGGAAACTAGCACAGGTCACTCCTTGGAAAGTAGA  1257

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1258  ATCTTTGCAAGCTACTCTCAGAAGCCATCACAGTTGCAACAACAGGGGAAATAAGCTATCGAACAAGAGGAAGT  1331

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1332  GACTGGAACCTAATGATACTAATTCAGAAGTCACAAGGCTGACTTGATGATTAAAAGATGAAAACTTGAGGCCA  1405

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1406  GCCCTACTCTAGGAAAGTCCTCACTCCCGAAGAAAGGAGACCTGAGCCACTAAGTAAGAAGTCCAGTTACCCTG  1479

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1480  TTGGATAAACCACATGGAGAAGGAAAGGCCCTGAGATACTTGGAGAGAGGGAAAAGTCCAGCTGCCCAGCACCT  1553

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1554  GAGCTGAGCCCAGCCTCAGCCAACCCCACCGGCTGACTGCAAACACATCAGTGACCACCAGTAAGACCAGCAGA  1627

Query   73  -------------------------------------------------------------------------  72
                                                                                     
Sbjct 1628  GCTGCACAGCCAAGCCCAGCCCAGATTGCAGAATTGTGAGCAAATAAAATGGATATTGCTTTAAGCCACAAAA  1700