Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_045998.2
- Aligned Length:
- 3435
- Identities:
- 65
- Gaps:
- 3363
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAGAAACCCAGAAGTTCTGTGAACAAGTCCATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAGCTGGTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGGCGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAACTCAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTGTTTTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATTTGTACTCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCTGGATTGAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGACACCTATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCTGAGTCATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTAAAGATGTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGTTTCTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTACCAGAAATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTGATTCTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATCAGAAGTATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTTCACCAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTATATATTATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATATTGGCAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGAGCTCATTTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGTCCTTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTACGTGTGTCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATTTTATGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATTTTAAGGGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAGTCTAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGACTGCATATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTATGCATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCCTACAGGTCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGCCTTTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTGTCTTTAGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGGTTGAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTCCTTAAGCCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCATGAAGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAGGAACTAAAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGTACAACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTCTAGTTCTTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCAAATTCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTTATTAACATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACCTCTAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGAATTATTCTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATGATCAGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GAAAGCACTGATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAAGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGAGTGCAGTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGGCTTCAG 2664
Query 1 --------------------------------------------------------------------ATGGGG 6
||||||
Sbjct 2665 CCTCTCAAGTAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGG 2738
Query 7 TTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------- 72
||||.||||||.||.|||||||||||..|||||||||||||||||||||.||||||.|||||||||
Sbjct 2739 TTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCAAAGTGC 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TGGGATTACAGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCCATTTTG 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GGATAATATCCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAAGTTAAT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GAATGTATTAATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTAAAGGTA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TCTGAGCACCTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAACCCTGC 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 AAACCTCATGCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTCATGAAT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 GGCTTCGTTCCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCTGGCTGT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TAAAACGAGGCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTCACGTTG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CCTCCCTTCATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAGAGCCGT 3404
Query 73 ------------------------------- 72
Sbjct 3405 GAGCCAAATAAAGCTCTTTTCTTTTAAACTA 3435
