Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_045999.2
Aligned Length:
3278
Identities:
65
Gaps:
3206

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGGAAACCCAGAAGTTCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGAACAAGTCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGCCCTGAGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAACAAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGCTGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATGAGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCATGCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAAGGAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTCTGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTGTTTTAAAGAAGGCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCTCATTTGTAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCTTGCTGGATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGATTGACACCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCATTCCTGAGTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCATTGTAAAGAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGTTTCTTTTTACCAGAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTGATTCTAATCAGAAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTTCACCATGTTATATAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATATTGGCATTGAGCTCAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGTCCTTGGTTACGTGTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATTTTATGTAATTTTAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAGTCTAGAAGACTGCAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTATGCATGTCCTACAGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGCCTTTCTGCTGTCTTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGGTTGAAATTCCTTAAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCATGAAGGGAAGGAACTA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGTACAACAGTCTAGTTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCAAATTCATGTTATTAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACCTCTAGCTGAATTATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATGATCAGGGAAAGCACT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAAGCTGGAGTGCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGGCTTCAGCCTCTCAAG  2516

Query    1  -----------------------------------------------------------ATGGGGTTTCTCCAT  15
                                                                       ||||||||||.||||
Sbjct 2517  TAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT  2590

Query   16  GTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-----------------  72
            ||.||.|||||||||||..|||||||||||||||||||||.||||||.|||||||||                 
Sbjct 2591  GTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCAAAGTGCTGGGATTAC  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  AGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCCATTTTGGGATAATAT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  CCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAAGTTAATGAATGTATT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  AATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTAAAGGTATCTGAGCAC  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  CTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAACCCTGCAAACCTCAT  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  GCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTCATGAATGGCTTCGTT  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  CCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCTGGCTGTTAAAACGAG  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  GCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTCACGTTGCCTCCCTTC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  ATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAGAGCCGTGAGCCAAAT  3256

Query   73  ----------------------  72
                                  
Sbjct 3257  AAAGCTCTTTTCTTTTAAACTA  3278

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