Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_073090.2
- Aligned Length:
- 4823
- Identities:
- 64
- Gaps:
- 4751
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCCCGCCTCAGCCCAACATGGCGATGCACAACAAGGCGGCGCCGCCGCAGATCCCGGACACCCGGCGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGCGGAGCTCGTGAAGCGGAAGCAGGAGCTGGCGGAAACATTGGCAAATTTGGAGCGACAGATCTATGCTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATTCGTGGCTGGGATCGGTATCTGACCAACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGAAGCTGAGCGGCTCTTCAGTAAATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCGGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACCAGCTCATTGAAAAGAGGGAGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCCAGGAGGACCCTGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCAGGGAGTCACCACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGCCCGTCTGGCATGTTTGATTATGACTTTGAGTATGTATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAGGTTAGGCTGGGAAGTTTTTTTTAAAAACAGAAAAACGTGATGGAGGATTGATCTGAAGTTAAACAAAAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACGAGCTGACTATTAGAAGACACATTAGTGCAGAAGCTTCCAGGCTGTAGAGCCCTGCTTCCCTTCTCTGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCACAAAGATAAACATCCTTCACCTGAGTTCGTGGCCATCCACCTCTGCTCTCCCAGACCCAGTGCCTGTGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTGAGTAGTTTGTTCTAAATGTGGTGACAAACAAGTCATTTCTGTAAGACATTGGGTCTTACTTTATGTCATT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTAGTAACAGAACTGCAGGAAGATGAAGACAATGTTGTAATCCCAGCAAGTTGCTAACTGTGCGTTTCTCCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTTAGAATGAATGTCTCCCCCAAAACTGGCTGGCACCAGCTTCATCTGTGATACCCTTCAAGAAATGTTCTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGTTTTGTTTTATGCTGAAAGTAGAACACAAGTCACATTTCAGATGGAGGCTGTAAATATCTGGCATTTTCTTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATTGTTTTATGTTTTCTTGTTTTTCTCTTGTTGTTTTTATCTTATTTTCTTTGGGGTTTTTTTGTAATGCCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTACAGCTCATACTTTCCTGCTGACATATCTGATCATCTCTTTCATGCAGTTGCCAATATTCATAACTGAAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAATCTGGTTTATCATAAGTAAAATGGGAAACTTGCCTCTGTTTTTTGCAAGGGGAGGTAAAGAGTGTTTAGTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTACCTATCTTAAATCTTTCTGAGTTGGTAGTAGATTCATGTTCAAGGAACAGGAAAAATGGAAAAACATAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTAAATCAGTTCTTTTTAAATAACTTTTTATTCTTTTGTATAAATAAAATTTCACAGGCTTCAAATTCTCATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTACTTTTAAACCCGAGATTGTTTTTTCACTTATTTATTCATATCATGCCTTATGGAAATTTCTTTTTCTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTTTCTCTCTTTGCTGGTATTCACCTGATTAAATATTGCTCTAAAAATCACCATGGCATATGGAAAGTCTCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATTATACCAAAAGTGATAACTTATGTCGTTCTTAAGTGGAGTGAAAGGATAGCATCAGTGAGAGCCAGTGTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCACCAGGTCTCCCTTTCTTGGAGGGCTTGTTGGGGCTGAGGAATCTGCTAGTAATCGTTACCTGCCTCTAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTGTGGTGAACTTGCGACAGGGTCTGGCTGCACATTGGAATCACCTGAGAAGCTTTAAAATACTCATGCCTGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATCCCATCCCTAGAGACTGGGGTACAGCCTAGTTATTGGGAATTTCTTTAAAAGAGTTCCTGGGATTCTGATAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAAGCCAGGTTGAGAACCACTACATTAGAAGACTGAATGGTTTAATTTACATCCTATGTTATGATTGGTCTAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGATAAGATTTGGGGTCTAACCTTTCCTTTCACTCTAGTTAGTCATAGTCCTTGACTTATGCCTATATCTTTGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGAAATAGTATGTTTCATTTGTGATAGTATTGGTAGGGCTGAATATGGATGGCATCTACTGTAAAACAAGTCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCTTGTCAGATGTGCAAAAGCTTTCACTCTTGTTCTCAAATAAACTTTTGTGGGTTTTTTTTTTTTTTTTTTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTGACTCTGGCTATTTAGATCTTTGACTGTGTCTTTGGTAGCAGAACTCCAGTGTCAGGATTTTTAAGGAAATA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTTTCTTATATTTAGATTATTCCTTAAAAAAAAAAATCCTAGAAGCATTCTGTATTTTTTGTCTGTTGGTCTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTGCTGGGAGGGAGGAGTGGGATGCCTACAGTTTCCTTCCTTTTGGGGAAAGCACACAGCAGACCTTAAAATA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTTTGACTCTTGGGCTGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCGGAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CACGAGGTCAGGAGATCGAGACCATCCTGGCGAACACAGTGAAACCCCATCTCTACTAAAAATGCAAAAAATTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCTGAGCGTGGTGGCGGGTGCCGGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGCGGAGCTTACAGTGAGCTGAGATAGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AAAAAAAAAATATTTTTGACTCTTAACAGTTTGAGATTGCTAGAGATGGAATAGTACTGCTCTGTTGCGCCACT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCACTCCAGCAGCCTGGGCGACAGAGCGAGACTCTGTCAAAAAAAAAAAAAAAAAGAAAGAATAGTACTGCTCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TAAAAAGATTATTTACGTATTTATGAAACTGCAGTGGGATGCCTAGTTTCCTTCCCTCTGAGGAAAGCACACAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGACCTTAAAATATTTTTGACTCTCATAGTTTGACATTGCTGGAGACAGAATAGTACTGCTCTTAAAAAGATT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATTTAAGTATTTATATATTTTATTTATTTATTTATTTATTTATTTATTTATTGACAGGATCTTGCTCTGTCACC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAGGCTGGAGTGCAGCGGCCTGATCAAAGCTCAGTGCAGCCTCGAACTTCTGGGGTCAAGCCATCTTCCTGCTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAGCCTTACTAGTACCTGGGACTATAGGTGCATGCCACCATTCCCAGCTAATTTAAAACATTTTTATTTTGTAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGATGGCTTCTTGCTATGTTGCCCAGGCTGGCCTCAAGCAGTCCTCCTGGCCTCAAGCAGTCCTTCTGCCTTGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCTCCCAAAGTGCTGGGATTATAGGTATCAAGCAATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGG 3404
Query 1 -------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTC 31
|||||||||..|||||..||.||||||||||
Sbjct 3405 CATGCACCACCATGCCCATCTAAGTTTTGTATTTTTAGTGGAGATGGGGTTTTGCCATGATGGGCAGGCTGGTC 3478
Query 32 TGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------------- 72
|.||||||||||||||||||.||||.|||||||||||||||
Sbjct 3479 TCGAACTCCTGACCTCAGGTAATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCCTGGC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACCTGGCAATATAGAGTATTCTTGACATCTTGACCTGTGCAGTAAAGAAGATAATTAAAATGAGCGATAAATAG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TCTAAGCTTGAAAGTTAAAGAGCCTAAGCTTGAAACACTCTGTGACTTAGTTTTTGCATTTATTCTGTCTTCTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TGCCCCCCAACCTTACTCCAAATTAATGAGGCATTATTTTATTTATTTATTTTTTTGAGACAGAGTCTTGCTCT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GTCGTCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCTACCTCCGCCTCCAGGGTTCAAGCAATTATT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCGCCTCAGCCTCTCGAGTAGCTGAGACTACAGGCGCGTGCTACCACACCCAGCTAGTTTTTTTTTATTTTCAA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TAGAGACCGGGTTTCACCATATTGGCCAGGCTGGACTCAAACTCCTGACTTCGTAATCCACCTGCCTCAGCCTC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCACCCGGCCTAATGAGGCATTATTGCTTAAAAATTCACATC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AAGCTGGGCATGGTGATATGCACCTTTAGTCCCAGCTGCTTGGGAGGCTTAGAGGCAGCAGGATCGCTTGAAGC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CAGAAGTTCAAGGCTACAGTATGCTATGATCATTTCTGTGAATGGCCACTGCACTTCAGCCTGAGTAACGTAGC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 AAGACGCTGTCTCCAACAGAAAATTGACATCTGAAGCCTTGACTACAGGGGGACTATACTGGTTTATGTGAAGT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GTGGGGAGAGAGCAGGATTGTGCTTCTTTGTACACATTTGCTTCTCCCAGGATAGTGTCATAGTGCCTAGGAAG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GTGATGTGTGTGTCAGATACAATGATAGTGAAAAGAAGGGATTGGAATTTTCATACCTGTGTCAGTCTAAATGA 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GCATTACCTTGTCTGAATTGTCTAAGTGGTAAGCTTCGTGATTTGAAACAGTTTTCACTTTGAAAAACTGCTTC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CGTGGATTAAAAGTTGTCACCACTAAAGTGGGCTGTGGTGGAGTCGATGCTGATCCTCACTTAGGGCAGTGGCC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TCCAAGGGGAAGAGGGCACACAGGATGGCTGGGTGGGGGTGGGAAGAAAAGATTAGGCCTTTGATTTATATTCA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTTTGAGGCTCAGCCTTATTTAGTTTCTCACTTTGGATGTATTTTATATATATACATCAAATATACATCAATAT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TAGTTCATTAGTACATGTAGGTCATTAATTTATAAATAAAAGGTTGAACCACAATAAACTGCTGATAATTGTTT 4810
Query 73 ------------- 72
Sbjct 4811 TTGATCTGTAAAA 4823
