Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_073091.2
- Aligned Length:
- 4793
- Identities:
- 64
- Gaps:
- 4721
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCCCGCCTCAGCCCAACATGGCGATGCACAACAAGGCGGCGCCGCCGCAGATCCCGGACACCCGGCGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGCGGAGCTCGTGAAGCGGAAGCAGGAGCTGGCGGAAACATTGGCAAATTTGGAGCGACAGATCTATGCTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATTCGTGGCTGGGATCGGTATCTGACCAACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGAAGCTGAGCGGCTCTTCAGTAAATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCGGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACCAGCTCATTGAAAAGAGGGAGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCCAGGAGGACCCTGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCAGGGAGTCACCACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGGTATGTATATTAGGTTAGGCTGGGAAGTTTTTTTTAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGAAAAACGTGATGGAGGATTGATCTGAAGTTAAACAAAAAACCACGAGCTGACTATTAGAAGACACATTAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCAGAAGCTTCCAGGCTGTAGAGCCCTGCTTCCCTTCTCTGACCTCACAAAGATAAACATCCTTCACCTGAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCGTGGCCATCCACCTCTGCTCTCCCAGACCCAGTGCCTGTGACTTTGAGTAGTTTGTTCTAAATGTGGTGACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAAGTCATTTCTGTAAGACATTGGGTCTTACTTTATGTCATTTTTAGTAACAGAACTGCAGGAAGATGAAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAATGTTGTAATCCCAGCAAGTTGCTAACTGTGCGTTTCTCCCTTCTTAGAATGAATGTCTCCCCCAAAACTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGGCACCAGCTTCATCTGTGATACCCTTCAAGAAATGTTCTCTGGTTTTGTTTTATGCTGAAAGTAGAACACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTCACATTTCAGATGGAGGCTGTAAATATCTGGCATTTTCTTATATTGTTTTATGTTTTCTTGTTTTTCTCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTTGTTTTTATCTTATTTTCTTTGGGGTTTTTTTGTAATGCCTTTGTACAGCTCATACTTTCCTGCTGACATAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGATCATCTCTTTCATGCAGTTGCCAATATTCATAACTGAAAATAATCTGGTTTATCATAAGTAAAATGGGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTTGCCTCTGTTTTTTGCAAGGGGAGGTAAAGAGTGTTTAGTAATTACCTATCTTAAATCTTTCTGAGTTGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTAGATTCATGTTCAAGGAACAGGAAAAATGGAAAAACATAAGTTTAAATCAGTTCTTTTTAAATAACTTTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTCTTTTGTATAAATAAAATTTCACAGGCTTCAAATTCTCATGCTTTACTTTTAAACCCGAGATTGTTTTTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTTATTTATTCATATCATGCCTTATGGAAATTTCTTTTTCTGTATTTTCTCTCTTTGCTGGTATTCACCTGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAAATATTGCTCTAAAAATCACCATGGCATATGGAAAGTCTCAAAATTATACCAAAAGTGATAACTTATGTCGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTAAGTGGAGTGAAAGGATAGCATCAGTGAGAGCCAGTGTTGCCCACCAGGTCTCCCTTTCTTGGAGGGCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTGGGGCTGAGGAATCTGCTAGTAATCGTTACCTGCCTCTAGTGCTGTGGTGAACTTGCGACAGGGTCTGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCACATTGGAATCACCTGAGAAGCTTTAAAATACTCATGCCTGGATCCCATCCCTAGAGACTGGGGTACAGCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTTATTGGGAATTTCTTTAAAAGAGTTCCTGGGATTCTGATAAGAAGCCAGGTTGAGAACCACTACATTAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GACTGAATGGTTTAATTTACATCCTATGTTATGATTGGTCTAAGGGATAAGATTTGGGGTCTAACCTTTCCTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACTCTAGTTAGTCATAGTCCTTGACTTATGCCTATATCTTTGTAAGAAATAGTATGTTTCATTTGTGATAGTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTGGTAGGGCTGAATATGGATGGCATCTACTGTAAAACAAGTCTACCTTGTCAGATGTGCAAAAGCTTTCACTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGTTCTCAAATAAACTTTTGTGGGTTTTTTTTTTTTTTTTTTTTTGACTCTGGCTATTTAGATCTTTGACTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTCTTTGGTAGCAGAACTCCAGTGTCAGGATTTTTAAGGAAATAGTTTCTTATATTTAGATTATTCCTTAAAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAAAAATCCTAGAAGCATTCTGTATTTTTTGTCTGTTGGTCTCCTTTGCTGGGAGGGAGGAGTGGGATGCCTAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTTTCCTTCCTTTTGGGGAAAGCACACAGCAGACCTTAAAATATTTTTGACTCTTGGGCTGGGTGCGGTGGCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CACACCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CGAACACAGTGAAACCCCATCTCTACTAAAAATGCAAAAAATTAGCTGAGCGTGGTGGCGGGTGCCGGTAGTCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTACAGTGAGCTGAGATAGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAATATTTTTGACTCTTAACAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGAGATTGCTAGAGATGGAATAGTACTGCTCTGTTGCGCCACTGCACTCCAGCAGCCTGGGCGACAGAGCGAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTCTGTCAAAAAAAAAAAAAAAAAGAAAGAATAGTACTGCTCTTAAAAAGATTATTTACGTATTTATGAAACT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAGTGGGATGCCTAGTTTCCTTCCCTCTGAGGAAAGCACACAGCAGACCTTAAAATATTTTTGACTCTCATAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTTGACATTGCTGGAGACAGAATAGTACTGCTCTTAAAAAGATTATTTAAGTATTTATATATTTTATTTATTTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTATTTATTTATTTATTTATTGACAGGATCTTGCTCTGTCACCCAGGCTGGAGTGCAGCGGCCTGATCAAAGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCAGTGCAGCCTCGAACTTCTGGGGTCAAGCCATCTTCCTGCTTCAGCCTTACTAGTACCTGGGACTATAGGTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CATGCCACCATTCCCAGCTAATTTAAAACATTTTTATTTTGTAATGATGGCTTCTTGCTATGTTGCCCAGGCTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCCTCAAGCAGTCCTCCTGGCCTCAAGCAGTCCTTCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGTATCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGCAATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCATGCACCACCATGCCCATCTAAGTTTTGT 3404
Query 1 -------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCA 61
|||||||||..|||||..||.|||||||||||.||||||||||||||||||.||||.||||
Sbjct 3405 ATTTTTAGTGGAGATGGGGTTTTGCCATGATGGGCAGGCTGGTCTCGAACTCCTGACCTCAGGTAATCCACCCA 3478
Query 62 CCTCAGCCTCC--------------------------------------------------------------- 72
|||||||||||
Sbjct 3479 CCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCCTGGCACCTGGCAATATAGAGTATTCTTGACATCT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TGACCTGTGCAGTAAAGAAGATAATTAAAATGAGCGATAAATAGTCTAAGCTTGAAAGTTAAAGAGCCTAAGCT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TGAAACACTCTGTGACTTAGTTTTTGCATTTATTCTGTCTTCTATGCCCCCCAACCTTACTCCAAATTAATGAG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GCATTATTTTATTTATTTATTTTTTTGAGACAGAGTCTTGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCACAAT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CTTGGCTCACTGCTACCTCCGCCTCCAGGGTTCAAGCAATTATTCCGCCTCAGCCTCTCGAGTAGCTGAGACTA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CAGGCGCGTGCTACCACACCCAGCTAGTTTTTTTTTATTTTCAATAGAGACCGGGTTTCACCATATTGGCCAGG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CTGGACTCAAACTCCTGACTTCGTAATCCACCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCA 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTGCACCCGGCCTAATGAGGCATTATTGCTTAAAAATTCACATCAAGCTGGGCATGGTGATATGCACCTTTAGT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCCAGCTGCTTGGGAGGCTTAGAGGCAGCAGGATCGCTTGAAGCCAGAAGTTCAAGGCTACAGTATGCTATGAT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CATTTCTGTGAATGGCCACTGCACTTCAGCCTGAGTAACGTAGCAAGACGCTGTCTCCAACAGAAAATTGACAT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CTGAAGCCTTGACTACAGGGGGACTATACTGGTTTATGTGAAGTGTGGGGAGAGAGCAGGATTGTGCTTCTTTG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TACACATTTGCTTCTCCCAGGATAGTGTCATAGTGCCTAGGAAGGTGATGTGTGTGTCAGATACAATGATAGTG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAAAGAAGGGATTGGAATTTTCATACCTGTGTCAGTCTAAATGAGCATTACCTTGTCTGAATTGTCTAAGTGGT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 AAGCTTCGTGATTTGAAACAGTTTTCACTTTGAAAAACTGCTTCCGTGGATTAAAAGTTGTCACCACTAAAGTG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GGCTGTGGTGGAGTCGATGCTGATCCTCACTTAGGGCAGTGGCCTCCAAGGGGAAGAGGGCACACAGGATGGCT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GGGTGGGGGTGGGAAGAAAAGATTAGGCCTTTGATTTATATTCATTTTGAGGCTCAGCCTTATTTAGTTTCTCA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CTTTGGATGTATTTTATATATATACATCAAATATACATCAATATTAGTTCATTAGTACATGTAGGTCATTAATT 4736
Query 73 --------------------------------------------------------- 72
Sbjct 4737 TATAAATAAAAGGTTGAACCACAATAAACTGCTGATAATTGTTTTTGATCTGTAAAA 4793
