Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_073092.2
- Aligned Length:
- 4854
- Identities:
- 64
- Gaps:
- 4782
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCCCGCCTCAGCCCAACATGGCGATGCACAACAAGGCGGCGCCGCCGCAGATCCCGGACACCCGGCGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGCGGAGCTCGTGAAGCGGAAGCAGGAGCTGGCGGAAACATTGGCAAATTTGGAGCGACAGATCTATGCTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATTCGTGGCTGGGATCGGTATCTGACCAACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGAAGCTGAGCGGCTCTTCAGTAAATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCGGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACCAGCTCATTGAAAAGACAGATTATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATGAAGACCATAGAAAGAAGAAAACTGGGCCAGATACGGTGGCTCATGCCTATAATCCCAGAACTTTGGGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAGGGGAGCCAGGAAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAGGACCCTGAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGAGTCACCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGCCCGTCTGGCATGTTTGATTATGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTGAGATTGATCTGAAGTTAAACAAAAAACCACGAGCTGACTATTAGAAGACACATTAGTGCAGAAGCTTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCTGTAGAGCCCTGCTTCCCTTCTCTGACCTCACAAAGATAAACATCCTTCACCTGAGTTCGTGGCCATCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCTGCTCTCCCAGACCCAGTGCCTGTGACTTTGAGTAGTTTGTTCTAAATGTGGTGACAAACAAGTCATTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTAAGACATTGGGTCTTACTTTATGTCATTTTTAGTAACAGAACTGCAGGAAGATGAAGACAATGTTGTAATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGCAAGTTGCTAACTGTGCGTTTCTCCCTTCTTAGAATGAATGTCTCCCCCAAAACTGGCTGGCACCAGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCTGTGATACCCTTCAAGAAATGTTCTCTGGTTTTGTTTTATGCTGAAAGTAGAACACAAGTCACATTTCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGGAGGCTGTAAATATCTGGCATTTTCTTATATTGTTTTATGTTTTCTTGTTTTTCTCTTGTTGTTTTTATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTTCTTTGGGGTTTTTTTGTAATGCCTTTGTACAGCTCATACTTTCCTGCTGACATATCTGATCATCTCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCATGCAGTTGCCAATATTCATAACTGAAAATAATCTGGTTTATCATAAGTAAAATGGGAAACTTGCCTCTGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTTGCAAGGGGAGGTAAAGAGTGTTTAGTAATTACCTATCTTAAATCTTTCTGAGTTGGTAGTAGATTCATGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCAAGGAACAGGAAAAATGGAAAAACATAAGTTTAAATCAGTTCTTTTTAAATAACTTTTTATTCTTTTGTATA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATAAAATTTCACAGGCTTCAAATTCTCATGCTTTACTTTTAAACCCGAGATTGTTTTTTCACTTATTTATTCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATCATGCCTTATGGAAATTTCTTTTTCTGTATTTTCTCTCTTTGCTGGTATTCACCTGATTAAATATTGCTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAAATCACCATGGCATATGGAAAGTCTCAAAATTATACCAAAAGTGATAACTTATGTCGTTCTTAAGTGGAGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAAGGATAGCATCAGTGAGAGCCAGTGTTGCCCACCAGGTCTCCCTTTCTTGGAGGGCTTGTTGGGGCTGAGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AATCTGCTAGTAATCGTTACCTGCCTCTAGTGCTGTGGTGAACTTGCGACAGGGTCTGGCTGCACATTGGAATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACCTGAGAAGCTTTAAAATACTCATGCCTGGATCCCATCCCTAGAGACTGGGGTACAGCCTAGTTATTGGGAAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCTTTAAAAGAGTTCCTGGGATTCTGATAAGAAGCCAGGTTGAGAACCACTACATTAGAAGACTGAATGGTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATTTACATCCTATGTTATGATTGGTCTAAGGGATAAGATTTGGGGTCTAACCTTTCCTTTCACTCTAGTTAGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATAGTCCTTGACTTATGCCTATATCTTTGTAAGAAATAGTATGTTTCATTTGTGATAGTATTGGTAGGGCTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATATGGATGGCATCTACTGTAAAACAAGTCTACCTTGTCAGATGTGCAAAAGCTTTCACTCTTGTTCTCAAATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AACTTTTGTGGGTTTTTTTTTTTTTTTTTTTTTGACTCTGGCTATTTAGATCTTTGACTGTGTCTTTGGTAGCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAACTCCAGTGTCAGGATTTTTAAGGAAATAGTTTCTTATATTTAGATTATTCCTTAAAAAAAAAAATCCTAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGCATTCTGTATTTTTTGTCTGTTGGTCTCCTTTGCTGGGAGGGAGGAGTGGGATGCCTACAGTTTCCTTCCTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGGGGAAAGCACACAGCAGACCTTAAAATATTTTTGACTCTTGGGCTGGGTGCGGTGGCTCACACCTGTAATC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCAGCACTTTGGGAGGCCGAAGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCGAACACAGTGAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACCCCATCTCTACTAAAAATGCAAAAAATTAGCTGAGCGTGGTGGCGGGTGCCGGTAGTCCCAGCTACTCGGGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTACAGTGAGCTGAGATAGTGCCACTGCACTCCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAATATTTTTGACTCTTAACAGTTTGAGATTGCTAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGATGGAATAGTACTGCTCTGTTGCGCCACTGCACTCCAGCAGCCTGGGCGACAGAGCGAGACTCTGTCAAAAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAAAAAAAAAAAGAAAGAATAGTACTGCTCTTAAAAAGATTATTTACGTATTTATGAAACTGCAGTGGGATGCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAGTTTCCTTCCCTCTGAGGAAAGCACACAGCAGACCTTAAAATATTTTTGACTCTCATAGTTTGACATTGCTG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GAGACAGAATAGTACTGCTCTTAAAAAGATTATTTAAGTATTTATATATTTTATTTATTTATTTATTTATTTAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTATTTATTGACAGGATCTTGCTCTGTCACCCAGGCTGGAGTGCAGCGGCCTGATCAAAGCTCAGTGCAGCCTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAACTTCTGGGGTCAAGCCATCTTCCTGCTTCAGCCTTACTAGTACCTGGGACTATAGGTGCATGCCACCATTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCAGCTAATTTAAAACATTTTTATTTTGTAATGATGGCTTCTTGCTATGTTGCCCAGGCTGGCCTCAAGCAGTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCCTGGCCTCAAGCAGTCCTTCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGTATCAAGCAATTCTCCTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCTCAGCCTCCCCAGTAGCTGGGACTACAGGCATGCACCACCATGCCCATCTAAGTTTTGTATTTTTAGTGGAG 3478
Query 1 ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-- 72
|||||||||..|||||..||.|||||||||||.||||||||||||||||||.||||.|||||||||||||||
Sbjct 3479 ATGGGGTTTTGCCATGATGGGCAGGCTGGTCTCGAACTCCTGACCTCAGGTAATCCACCCACCTCAGCCTCCCA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 AAGTGCTGGGATTACAGGCATGAGCCCTGGCACCTGGCAATATAGAGTATTCTTGACATCTTGACCTGTGCAGT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AAAGAAGATAATTAAAATGAGCGATAAATAGTCTAAGCTTGAAAGTTAAAGAGCCTAAGCTTGAAACACTCTGT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GACTTAGTTTTTGCATTTATTCTGTCTTCTATGCCCCCCAACCTTACTCCAAATTAATGAGGCATTATTTTATT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TATTTATTTTTTTGAGACAGAGTCTTGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TACCTCCGCCTCCAGGGTTCAAGCAATTATTCCGCCTCAGCCTCTCGAGTAGCTGAGACTACAGGCGCGTGCTA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CCACACCCAGCTAGTTTTTTTTTATTTTCAATAGAGACCGGGTTTCACCATATTGGCCAGGCTGGACTCAAACT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CCTGACTTCGTAATCCACCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCACCCGGCCT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AATGAGGCATTATTGCTTAAAAATTCACATCAAGCTGGGCATGGTGATATGCACCTTTAGTCCCAGCTGCTTGG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GAGGCTTAGAGGCAGCAGGATCGCTTGAAGCCAGAAGTTCAAGGCTACAGTATGCTATGATCATTTCTGTGAAT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GGCCACTGCACTTCAGCCTGAGTAACGTAGCAAGACGCTGTCTCCAACAGAAAATTGACATCTGAAGCCTTGAC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TACAGGGGGACTATACTGGTTTATGTGAAGTGTGGGGAGAGAGCAGGATTGTGCTTCTTTGTACACATTTGCTT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CTCCCAGGATAGTGTCATAGTGCCTAGGAAGGTGATGTGTGTGTCAGATACAATGATAGTGAAAAGAAGGGATT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GGAATTTTCATACCTGTGTCAGTCTAAATGAGCATTACCTTGTCTGAATTGTCTAAGTGGTAAGCTTCGTGATT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TGAAACAGTTTTCACTTTGAAAAACTGCTTCCGTGGATTAAAAGTTGTCACCACTAAAGTGGGCTGTGGTGGAG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TCGATGCTGATCCTCACTTAGGGCAGTGGCCTCCAAGGGGAAGAGGGCACACAGGATGGCTGGGTGGGGGTGGG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 AAGAAAAGATTAGGCCTTTGATTTATATTCATTTTGAGGCTCAGCCTTATTTAGTTTCTCACTTTGGATGTATT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TTATATATATACATCAAATATACATCAATATTAGTTCATTAGTACATGTAGGTCATTAATTTATAAATAAAAGG 4810
Query 73 -------------------------------------------- 72
Sbjct 4811 TTGAACCACAATAAACTGCTGATAATTGTTTTTGATCTGTAAAA 4854
