Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_075083.3
- Aligned Length:
- 6610
- Identities:
- 65
- Gaps:
- 6538
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAGCCACAGGGACAGCCGGTGGGCTCGGTGGGGCTGCAGAAGGTCGGGGCTGCACTGCTCTCGGCCCCCACAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTTGGTTGGTTGGCGTGGTAAGTGCCCTGATCCCTGGTCCTGAGAACTCAGGCTGGCACAGGGATTCCCAGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CATCTACCACCACGCAGCTGGAGCAGGGCTGAGCCCAGGAGCATGGAGATGGACGCCCCCAGGCCCCCCAGTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTGTCCCTGGAGCAGCATCGAGGCCCGGGAGGGCTGCCATCAGCAGCAGTGAGCCATCACCTCTGCTGGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTGTGTTTTTTCTCCTAGAACTGTGGACAACGGAAGGCTGAGCCCCATCCATTGAGTTCCTGGGGCCCCACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGGGGCTGCTGTGGCCAGGGTGCACGGTCACAAATGAAGACACCAAGGCGCAGAGAGGTGACTCAGCCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCAGTCACCTATCTGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCATGGATCTGCTGGCTGGGAAGGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTCAAGGCTCCCAGGCCCCGCAGGCCCTGGATAGGACACCGGATGCCCCGCTGGGGCCCTGCAGCAATGACTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCCCGGAGCTGGGCGGACCCTGGCACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCTGGCCTCCCTCCTGCTGGTGGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGACTTCACACAGGTGGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACCCGCGGGGGCGGGCACCCCGCCAGGACCGTCGCCCTGGACCGGCTCTTCCTGCCTCTCTCCCGGGTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTCCCACCCCGGGTCTCCATCACTATCGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACTTCGTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCCTCTGACCTTCCGGGATCTCAACACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACGAGAAGCTGTGTGCCGACCGACTCATCTGCTCGGTCTTCCCGCACGTCGGGGAGCCCAGCCTGGCGGTGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCCCAGCCAGGGCCCTCCTGATCCTGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCAGGGGGCCTGGTGGACCGGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACGGAGATCCGGGGCTTTAACGAGGAGGAGATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGACCAGGCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGGGCCCTGTACCTGATGTGCACCGTCCCAGCCTTCTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGCTCACGGGGATGGCGCTAGGCCACCTGTGGCGCAGCAGGACGGGGCCCCAGGATGCAGAGCTGTGGCCCCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGACCCTGTGCGAGCTCTACTCATGGTACTTTAGGATGGCCCTCAGCGGGGAGGGGCAGGAGAAGGGCAAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATTGGGCCGTCTGGCCTTCCAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGCTGCTCAAGAAGAAATACGTGTTTTACGAGCAAGACATGAAGGCGTTTGGTGTAGACCTCGCTCTGCTGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGGCGCCCCGTGCAGCTGCTTCCTGCAGAGAGAGGAGACGTTGGCATCGTCAGTGGCCTACTGCTTCACCCACC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTCCCTGCAGGAGTTTGTGGCAGCCGCGTATTACTATGGCGCATCCAGGAGGGCCATCTTCGACCTCTTCACT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGAGCGGCGTATCCTGGCCCAGGCTGGGCTTCCTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGAGGACGGGAGGCTGGACGTGTTCCTGCGCTTCCTCTCCGGCCTCTTGTCTCCGAGGGTCAATGCCCTCCTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCGGCTCCCTGCTGGCCCAAGGCGAGCACCAGGCCTACCGGACCCAGGTGGCTGAGCTCCTGCAGGGCTGCCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCGCGCACCGCGCTGCCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGCCTACCTCCTGCAGGTGTCCGACGCCTGTGCCCAGGAGGCCAACCTGTCCCTGAGCCTCAGCCAGGGCGTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTTCAGAGCCTGCTGCCCCAGCTGCTCTACTGCCGGAAGCTCAGGCTGGACACCAACCAGTTCCAGGACCCCGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATGGAGCTGCTGGGCAGCGTGCTGAGTGGGAAGGACTGTCGCATTCAGAAGATCAGCTTGGCGGAGAACCAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTCTCTGGACCTCCGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGGTGAAATTCATGTACCATAAAATTGACTGTTTTAGGCGGGTCCCAGAGGCTGATGCCTGTAATCCCAGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTTGGGAGGCCAAGGCAGGTGGATCACTTGAGGTCGGGAGTTCGAGACCAGCCTGGCCAACATGCCTCCAGGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCATGCTGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACCTGCAGAAGAACAGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGGAGTCTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAAGAGCTCATGTTCTCCAGTAATAGTATTGGTGATGGAGGTGCCAAGGCCCTGGCTGAGGCCCTGAAGGTGAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCAGGGCCTGGAGAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGCACCAACCAGACCCTCCTCAGCCTCAGCCTTCGAGAAAACTCCATCAGTCCCGAGGGAGCCCAGGCCATC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCTCATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGGACCTGACAGCCAACCTCCTCCACGACCAGGGTGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCACCTCCCTTCACCTGCAGTGGAACTTCATCCAGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCGGCGCTGCCCAGGCCCTGGGACAAGCACTACAGCTCAACAGGAGCCTCACCAGCTTAGATTTACAGGAGAAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCATCGGGGATGACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCTCTCTATCT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAGGTGGCCTCAATTGGTGCTTCAGGCGCCCAGGTGCTAGGGGAAGCCTTGGCTGTGAACAGAACCTTGGAGA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTCTCGACTTAAGAGGAAATGCCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAAACTCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGTCTCCGGAGACTCAATCTTCAAGAGAATTCTCTGGGGATGGACGGGGCGATATGCATTGCCACAGCACTGTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGGAAACCACAGGCTCCAGCATATCAATCTCCAGGGAAACCACATTGGGGACTCCGGGGCCAGGATGATCTCAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGGCCATCAAGACAAATGCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGGCAG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGGGCCTGTCTGGGAGCTGGGAACGCTGCTTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTCAGCACGAGAGCCGGGCTCTGCAGGGAGGAAGGAGAGGTGCTGCCGGAGGAGGTCGTGAGCTCCTCTTCTGC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTACTCTGTTATGGCACAGAGAAGGGAGGGGCCACCCCCAAGGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ACTAGGGGCCAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGTTCCAGCTTTACACCCTGAGGACTTCATGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GTCCCCAACCTTTAAAAATGTTTATTACTGCCCCTTTCCACTCACCTGGTTAAAAATCATCCCATGCTCTGAGA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TGAGCTGCCACCTCAAGCCCGTGAGGAGCATCCGTTTGGTAGGGGTAACAGAGGGGACCCTTCTTTATCTTCTC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAGAAGAAGATTTCAGGGTATCATCCTTACAGACATGAAAAAGCTATGGGAAAATTGTGAAGATAAATGAAAGT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TTTAATTCTAGGATTCTGGAAACAGAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTTTTGTTTGTTTTTGAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 ATGGAGTCTCGCTCTTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCCCTGCAACCTCCGCCTCCCG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GGTTCATGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGAATACAGGCACCCGCCACCATGCCCGGCTAAT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TTTTGTAGTTTTAGTAGAGACGGGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATC 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CATCAGCCTGGGCCTCCCAAAGTACTGGGATTACAGGCATGAGCCACCACACCTGGCCCCATTTTTTATTTATT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 ACAAAATCAAAGACATGGGTGATGCCTGGCACATGTTGTCTGGAGTCTGGCACACTGGTTATCAATAGCACATT 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 CAGTGTATTCAGTGATGTCATTCTTTATTTATTTTTGAGACAGAATCTGTCACCCAGGCTGGAGTGCAGTGGCA 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TGATCTCAGCTCACTGTAGGCTCTACCTCATGGGTTCCAGTGATTCTCCTGCCTCGGCCTCCCAAGTAGTTGGG 4958
Query 1 ---------------------------------------------------ATGGGGTTTCTCCATGTCGGTCA 23
||||||||||.||||||.|.|||
Sbjct 4959 TCTACAGGCACGCACCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGATCA 5032
Query 24 GGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------- 72
|||||||||..||||||||||||||.|||||||.|||||||||||||||
Sbjct 5033 GGCTGGTCTTTAACTCCTGACCTCAAGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GCCACTGCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACAGCTTCCATGGA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 GACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGAAAAAAATCCAAATGG 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 ACATCAACAGCTTTCATCAACTAAATAACCACAGAAAATATTTATGAAGACTATAAAGCAATGATTACTTTTGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ATTGGAAAGGAATCACTATTATTTGAAATGTTTCTTCAAAAGTGAGCATCCGGACAGGAACCATCATGGATGCT 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 GAGGCCATGGATGAAGGCCTACTCGGGAAGATGATATCCTTGCAGTCTCAAAACGGCACCCCACAAAGGTGATA 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TCCTAATTTACAAAGGGAAAAAGGTACCTTAATCTGAAATCTGGCAAATGCAGCCTCAACAGAAGTGACAGAAT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGATGCACCACGGAGTCGTCTCTGATG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 TATTCTTGTCAAAAAATGTTTGCCTGATTCTAATCATGAAAGAACAATTAGAAAAAATCCAAATTGACAGATAT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 TCTGCAGAATAAATGGCCTGACCTCATCAAAAACATCAATGTCATGAAAAACACAAAACATTGCAGATAGCGTG 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 AAATTAAAGATTACAGAGATATAATTTAATGCAAGATCTCTGACTGGATCCTAGACTGCAGGAAAAAGTCTGCT 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 ATAAAGAACATTTGGATCACTTGTAGTAGCTGGGAAATAAAACAAAACATTATTTGTAAAAGGGGGGAAATCTG 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 AACATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTGACAGCTGTTTTAGTACTT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 TCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCA 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 GTAGCCAAACACTGGAGAAAGCTGGGCCCTACAGAAACCTAACGCTGAAGAAACCTCAGGAGCCAAACTGGTGG 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 AGAAAACAAAGAGTCCTCCCTCTCTCCCTTTTCAAATAATGATCATACATCTTCAAGCTGTCTGAAATGGTTAA 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 GGAGTTCAGTCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCACACAGACCCCATCAGAGCAAAACAGACAA 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 GAGAATTTAATTCATATCCACATAGAAAGGACTTCTAGGTAGGAGGTAGACCCTTTAGCTCCCTTCCAATTAAA 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 GGAGTCCCCAATTCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGTTGCTTACC 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 TAAATGAATACAATTTCCTTCCAGACACGTGACACTGATATTAAAGTGCTAATGAGAGGGATCTATTTCTTCTT 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 GTACGCTAAAAGAGAAACAGCAGTTCAGATTTCCCATCAGAAGTCCGAGGACTTTGTTCTTGATAACTACTACC 6586
Query 73 ------------------------ 72
Sbjct 6587 AATAAAAATTGAGTATTTGAAAAA 6610
