Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_103742.1
- Aligned Length:
- 5436
- Identities:
- 63
- Gaps:
- 5364
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCATTTGGTGGGGCCTTTGTATCTCACTCCCGCCACAGCTTGGGATCGGTCTCTGCTGTTTTACGTCCTCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGGAGCCCCCGGTGACTGTCACAGCCTCTTGCCCTGTGATCTGCAGGTTCTGGGAGACGCACAGCTAAGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAGGACATCCTGGAAGCTGGGAAAAGGTTCTGACAACAAAGGAGATTGTGACATATTGCTGGGCCTAACACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGTGATGTTAGTTATTTGCTTTGGCTGTGCCCTTGGAAGGCATTGAGACATACTGCTGTGCCCAGCACCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGATGTAACGTGACTCTTCTGCTTCAGGCCTGCCAAAAGAAAAGATTGTGACAGATCACTGGACCCAGCACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGTAGGATTGTGACATATATCTGGCCAAGCGTACAGATGTAATGATGACTGTCATACCTTGAAGAAGCCAATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGAGAGAATGTTGCTCTCAGGCTTAGGAAAATGAGGAAGTCTTTCTGTACAAAAGTCATAAAGAATTACTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTCTCACATATATTACGCCCTAGTGTGTTACAGAGAATGTCATAACAGGGCCCAGCACACAAGTGAGATTGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGTCCTATGCACACTACACCAACCTTTACAGTTGTCACCCTGACCCATTGACAGAGTCTGCTAGTGAGGTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAATTACATGTGAACACAGTCCGCAGTTGGAATTGTGACTGTCATATGTGAACATCTGGCTACAGTTGGGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGACTCATTTCTAAATCCAGCTCATAGGAAGGTGAAGACTCTCCTATCTGGACTCAGTTGGTGAGAGAGATGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGACTCTCATATCTGGGCTTAGAACCACAGGAAAGATTCTGGAGCTCCTTGTGCAAAGGTCATAGAGGATTATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCTTGCATATTGTATAAAGTCCTCAGGTGACACAGAGTGTCTCTCGAATGCACACCCAGGCAACAGTAAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGTCATTCTCCCACATAAACACATCCCACTGTTGAAGTTCTGAATTTCACAGAGGCTGTCAAAAGTTGGATAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGCCTCTCATGTGTGGATCTGGTCCACAGGTGGGTTAGTGACTTCCAGACCAAGGTTCAGCGCACATGTAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGTGACTACACTAAGAAGATACAGTCTGCAGAAGAAACTGTGGCTCTTTTGCACACATTCTGTCAATCATTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATTGCGACTCATGTACTTAGACCCAACATACAGGAGGTGTTGACTTTCATACCTTTAGAACCTGGACATGTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAATTTCTAATCTAATCCCTGGACTTTCCTGCAGGTGTGATTGTGTGCATTGCAAAGCACCTTAGTGATTTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTCCTGCCTTGGCCAAGCACACAAATGAGATTGTGACATATGGCTTGACTCTGAACCTCCAAGATGTGACTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTTTCCAGCCTTGGAGCTGCCCACATGTTGCATTGTGACATATTCCTAAGCCCTGCACTCAGGTTATGTGAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTCCTTTTTTGCTTAGGCCCTGAATATTTTTCATGTTAAGACATATTACTAGGTCCAACACCTATAAAATGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGACTACCACCTGGGCTCTTTCTACAGAGGGCCTTGTGACATACCTCTGCATCAATAACCTAGGAGATGTGATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCCATTTTTGCCTGTACGTGCCCCACAGAAAAAATTGTGGCTGGCCCAGGTACCAGGTGATGTGTCTCTGCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGGCCTGGACCACAGAGAGCATTGTTACTGATTGCTGGGCTCAGCACCCAGGTGATGTGACTCTGCTGCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGTGCTGCTTTCAGGAGAAGGTTGTAACTTATTCCTGGCTGAGTATGCAGTCACACTCCTGACTGATCTCTGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTCAGAAAAGGTTGTGTCAAGCCGGGCCCGGTGGCTCATGCCAGTAATCCCCAGCACTTAGGGAGACCGAGGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGGTGGATCGCCTGAGGAGTTTGAGACCAGATGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTAATCGGGTGTGGTGGCGGGCACCTGTAAACTCAGCTATTCGGGAGCCTGAGGCAGGAGAATTGCTTGAACCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAGCAGAGCAAGATTCCATCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGGAAAAAAATTACAAAAATTAGCCAGGCGTGGTGGTATGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACAGCAGTCACTTGAACTTAGGAGGCGGAGGTTGCAGTGAGCCAAGACTGTGCCATTGCACTCCAGCCTGGGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGGTTGTGTCATATTCCTGGCTAAAAACCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGATGATGTGACTCTCCTCTCTCCCTATTCATAGGCAGGATTGTAAAATATATCTTTTTTTTTTTGAGACAGTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCATTTTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCTTCCTGGGTTCAAGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AATTCTCTTGCCTCAGCCTCCTTAGTAGCTAGCCACCACACCTGGCTAATTTTTGTATTTCTATTAGAGATAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTTTCCCAATGTTGGTGAGGCTGATCTCAAACTCTTGACCTCAGGTGATGCACCTGCCTCAGCCTCCCAAAGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTGGGATTACAGGTGTGAGTGACTGCGCCTGGCCTGTAAAATATATCTTGACCTAGATCACAGATGCAATGATT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTCTCATACCTCACAGTATTTAATAGGAGAGATGCTCTCTCTTGCTCTCGCTCTCTTTTTTCTTTTTTTTTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTTGAGACAGTTTTGTTCTTGTTACCCAGGCTGCAGTGCAATGGCGTGATCTCTGCCCACCACAACCTCTGCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCACGTAGCTGAGATTACAGGCATGTGCCACCACGCCCAG 2960
Query 1 -----------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGT 51
||||||||||||.||||.|||.||||||||||.|||||||..|||||||||
Sbjct 2961 CTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCTATGTTGGTTAGGCTGGTCTCGAACTCCCAACCTCAGGT 3034
Query 52 GATCCGCCCACCTCAGCCTCC----------------------------------------------------- 72
||||.|||||||||.||||.|
Sbjct 3035 GATCTGCCCACCTCGGCCTTCCAAAGTGCTGGGGTTACAGGCATGAACCACTGTGCCCAGCCCAAGATGCTGTC 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TCTTAACAGCTAGGCCTAGAGTCATGAATATGATTCTGGGTCTCCTTGTACAAAGGTCATGAAGAATTGCCACT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TTCTTGCATACTGTATAAATCTCTTGTGGTACAGAGAGTGTCATTACAGGGTTCAGCATACAGATGAGATTGTT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TCTCATATACACTCCCCACCAACTGTTAGAATTGTCACCCTCACACATGGACAGAGCCCACTGGTGAGGCCCTG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AATCTCACACACACACACAGTCTACAGTTAAAATTGTGACTGTCATATGTGAACATCTGGCTAGAGTTGAAATA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ATGACTTATTTCTAAATCCAGTTCATAGGTGAGAATTCTACCTGTCTAAGCCTAGGTAGGATAGTCAACATGTC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 CCTAATTGGCTGGGGGACATGTTGACTCTCCTACCTGGGCTTAGGGCCAAACAGTTCATGGAAGGGATGAAGGC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TCTCAGCTCTCATGCACAGATCCAGTTGGTGAGATTGTCACTAGCATACTTAGACCCAACATACTCTGATACCT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AGAACTGGGACATGTGCAGGATTTTTAATTACTGGACCTTCCTGCAGGTGTGATTGTGACATATGTCTTTGTTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CACACCTGAGTGGTTTGATGTTCCTGCCTTGGTTCAACCCAAAGTGAAGATTGTGATGTGTCACTGGACCCAGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 ATCTCAGTGATGTGACTCTTCTTTTTGGACACCACAAATTTTGGGTATTGTCAAATATTGCTGGATCCTGTACC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CATGTTATGTGACTCTCCAACCTATGTCCTGCATGTTGTGCCATATTGCAGCACAATGTGTCACATTAGACATC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 ATTACATATTGCTGGGCTCAACACCCAAGTGATGTAACATTTTCCTGGGCCTTGACTACAGGGGGCTTTGTGAC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 ATAACTGAATGCCCATAACCATGGTAATGTTACTCTTCTCCTGCCTGGTCTCTGCTCACAGGGAAATTGTGACA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TACCATTGGCCTAGCATCTTGGTGATGTGACTCTCCTCTTTTTCTCAGGCCCCACATATTTGGGTATTGTGACA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TACCCAAATGTGACACTGGGCTCAACACCTAAGGGACGGGAGTTCTCTACCTGGCCCCTTCCTGAAGGGGGCAT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGTGACATACTTCTGCACAGGTATGTCACAGTTATTACCTAGGAGATGTGACTCTCCTCTTTTGCCAGCACCCT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GCTTACAGGGAAAATTGTGGCACATTTCTGTGGCCAGCAACCAGGTGATGTGTTTCTCCTGCTTGGGTCTTTAT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TACAGAAAAGATGGTTGACATATCACTAGGCCCAGCATCTAGGCGATGTGACTGTCTTCTTCTGCCTGGTCCCT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GCTTACAGGAACATTGTAGCATATTGCTATGCCCAGCACTTTTCTCTTCTTTTAGGTTTTGCCTGCAGGAGACT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TTGTGACATTGCTGGGCCCTGCACTGACATTATCTGACTCTTCTGTCTCTGCCTACTTGGGCCATTGTGACATA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TTGCTGGGTCCAACATCCAGGTGATGTAACTTTTATGCCTGGGTCCTGGCACCAGAGGACATTGTCTTTGCACC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 ACTCACACAGGTGATGTGATTTTCTTCTGTTACCTGGTCTCTGCTCACAGGAAGAATTGTGACCTTGGCCAGGC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TCGGTGGCTCACACCTGTAATCATAGCACTTTGGGAGGCCGAGGCGAGTGGATACCTGAGGTCAGGAGTTCGAG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 ACCAGCCTGGCCAACATGGTGAAACCCCCATCTTACTTAAAACACAAAAATTAGCTGGGCGTGGTGGCAGGCGC 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 CTGTAGTTCCAGCCACCCACGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGTAGGCGGAGATTGCAGTGAGCC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 GAGATTGCGCCACTGCACTCCAGCCTGGGTGACAGGGAGACTCCATCTCAAAGAAAAAAAAAGTGACCTTTTGC 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AGCACATAGCTGATTTGACTGCTTTGTGGAGTACACCAAGCAGGTTGTCAAACTGGTGGTCCCTTTACTGAAAT 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TTTATTTCCACAATGGTGTTGGAGGGGCAGCAGCAGAATCCGTGCCTTTTCTTCTGGAGTGTGTGAGAGTCCGT 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 GGTCCTGAGTATCTCACACAGATGTGGCAATTTATGTGATGTTCTGATTAAGACCATTGGTACAGAAACAGATT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 CAGATGTCCTCAGAAATAATGCATTGTTTAGCAAAGTGCATTGAAGTTATGGGAGATGGATGCCTTAATAATGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ACACTTTGAAGAACACCTTTGCCACATGTCCTCAGGACCTTCTGAGGGCTGTGTCATGGGGCATGGTCACTCAT 5402
Query 73 ---------------------------------- 72
Sbjct 5403 ATTTGACTCAATAAATTTCTTCAAATATTTTAAA 5436
