Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_110251.1
- Aligned Length:
- 4209
- Identities:
- 63
- Gaps:
- 4137
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTATTCTGTAAGGACATTTGTGTTTATATATATCTGTCATATGTATATATATATCATATATATATCAGTCATA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATATATCTCACACATATATGTAAGTGATTTTATGCTATGTATCTTTTTTTCTTCTGATATCTTTTTCTGGTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAATGTTAGTTTAATGCTAGCTTCATCAAATAAGTTGGGAAGTGGTCTTTTACTCATATTTTGAAAGAATTTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGAATTACTATAAATTGTTAAGGAGAATTTTTGTAGAATTTGCTAGTGAATATATTTATGTTTTGAATTTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTGTGGAAGGTTTTTACTACAAATTCCACTTACTTAGTAGAATTAAGATTATTCAAGTTATCTAATTTTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAGTAATTCTGGTCTCATTATGTCTTTCAAGGGAATTTTTTTCATTTTTTAATATCATTTTATAGCTTTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTAAAAGTTCTGAATATGAGTGGCTCTCTGCCTGCTCCCTTTCACCACCTTAATATCTTAAGTGAATAATGCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTCATCAAGAGGGTTAAAACTAATCATCAGCTGATGGCAGTTCACTTTTTGAATTACAAAAAACTTTCCCCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGCCATTTATTTTACTCATAAGCAACCTAACTATATTATAGATTCTAAAATATTATCTCCAAAGCCCCTAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGATGCATACATTTAGTCCAAAAGGTTTAATAACTCCCCAAGCTGATATTTCCCTTTCTCCTTTGATATTTCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAATTTGGAGTGCCCATTGTCTGTTTTATTTCATATTGGGACAAGCTGAACAGGGACTAAGGTGAAGGCAGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCATTCAGGGCAAATCGTTTAAGGAGGTACTACAAATACAAGGTCAACACTTGCAGGAAACTAAGAAAGAGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTCCTTAAAATTTGTGTCCTAGGTGTCTTATCTAGTTCTGGCCTTTTTAATGTGAATTCTTTTTTTTTTTTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTGAGATGAAGTCTGGCTCTGTCACCCAGGCTAGAGTGCACTGGTGCGATCTCGCCTGACTGCAACCTCCACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCTGGGTTCAAGGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCACACCTGG 1110
Query 1 ------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGG 50
|..|||||||.||||||.||.|||||||||||.|||||||||||||.|||
Sbjct 1111 CTAATTTTTGTATTTTTAGTGGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTGAGG 1184
Query 51 TGATCCGCCCACCTCAGCCTCC---------------------------------------------------- 72
||||||.||||||||.||||||
Sbjct 1185 TGATCCACCCACCTCGGCCTCCCAAAGTGCTGTGATTACAGGCATCAACCACTGCACCCAGCTTGAATTCTTTG 1258
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1259 TGTCCTCTAAAAACTCAAAATTATTTTTTAGTATTTTACCAGAAACATGGGAGGCATCAATTTAAAAGGAATGC 1332
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1333 ACAGAAGACACTTCATCACTACTTCCAACCAAGCAGTAATGGGCTGGAGATCCTAGATTAAGCTACTGGCAGAT 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 CTGGTGTCTGGCGAGGGCTCTGCTCCTGGTTTGCAGATGGGTGTCCTCTCATTATGCCCTCGCATGGTTGAGAG 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 AAAAATCATCGTTCTTCTGTTTCTTCTTAGAAGGGCACTAATTTTATTCATGAGCTCCATCCTCATGACCTAAT 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 CACAGCCTAAAGGCCTCACCTCCTAATACTATTATATTGGGGGTTTAGATTGCAACGTATGTATTTGGGGGGGT 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 CGGCACAAACATTCAGCTCATAACATCTTGTGAATCACTTTTAATTGCAATGTTGGAACATTGCTTTAAAATGA 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 TGCAGGTCTTATTTCCATATATGCATTAGGCAGTTCTTGCATTGCTATAAAGAAATACAGGAAACTGGGTAATT 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 TATAAATAAAAGAGGTTTAATTGGCTCACAGTTCTGTAGGCTTTACAGGAAGCATGGTGGTGCTCAGATCTGCT 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 TGGCATCTAGGGAGGCCTCAGGAAGCTTCCATTCATGGCAGAAGGTGAAGACAGAGTAGGTATGTCGTGTAGTA 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 AAAGCAGGAATACGCAAGAGACAGAGTGGGGGGCGGTGCCAAACACTTTTAAATGACCACATCTCATATGAATT 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 CAGGGCAAGAGCTCACTTAATCACCAAGGGGTTGGCCCAAACCATTCATGAGGGATCTGCCCCCATTATCCAAA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 TCCCTCTGCCAGTCTCCAACATTAGGAGTTACACTTCAACACGAGATTTGAGTGGGGACAAATATCCAAACTAT 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 ATTAAGAAGAAACGCAGCAGTTCCCAATTTTGTCTCTCATCACCCTCCCACACACCAAATCATATATGTGAGGA 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 GTACTTTTATATGCACAACTTGCCCTATTTAGAACTGTTCTGGAATGAGTGCATTTCCCATAGTACTATCTAAA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 ATTCCATCCCCTGCAGTTCCCTTCAAGAAACCACATGACAGTATCAATAATGCATTGCATTTTAGGAATAAAGT 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TAAATATTTTCTAATTTATTTTAACCATTAATAAACTGTTCTTAACTCTTTTTATAACAATAATTTTTAGATCA 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 GTTCACAAGTGATTACAACACACACGGCAGCAAGATGGATAATTGCTGTCCTAATGCATACATTACACTAAACA 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 TTATTACATACAATGATATTGCCAAGGATTTAAAATTTTGATCAGCAGTTTCAGGAAGCTAGGAGCTTTTAACT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 AAATGGATGAATCATGGAGAAGAGTCCCGCCATTTCTCGTTCAAGATTGGTGACTCAGTGTCAGTGGGACATGA 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 GACTTCTATGATCTGACCTTAGAATGACCCCTTTTTATGGTGGAACAAGGTTTTAAGCAAGGCCATTCCCCTGG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 AGCCATAAAGGATTGACTAGGGAAGATTGCACTGAGCTTTGCTATGAACAGGGCTGCTGCATTTTTGTGATTTT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TCCCCAGTCTGTGGTTTTTCCTGAGCCTGTATCCAGACAGTGGTCATTCCAAGTCCAGCTTTGCTGTCTGTTAC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 AGCTTCTGTTTGACTATGTCTTTATACTCTTGCCTTATTAAGTTATAAAACTGTTTATTGCTTTATTGTCTCAG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 CTCAAAGGTGAATAACAAAACCCCAAGCATATGTCAGCCTTGGAAATTTAGTATTGACCTTCCTGGGCCCTCAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TGCCTGCTCATTTCCTATACCTAGCATTTACGTTTCCAATGCTTCATCTACACCTTCATTCACTACTACCTATA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TGTCATTTGCCTTATTATCTATGGTACGTATACTGAGTTCTAGTAAAATAGTATTTCAAGTGCAAGTTTACACA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TTCCTTATATTAACTTTAATTCAATACTTGCCATTTCTTTTTTGCTTCAGAACCAGGAGTTGAAAATATTTCCA 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TTTGTCTTTTAAAGAGGTTATAAAATTGTCACAAGGACATGGGACATGCTGGCTATTTTTCCCTTTTTACTATT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TTATAGCATCCAATTAGGTGGATAATAAAATTCTTATTTTTCCAATGAGTAGTCCAAGACTTCACGAATAAAAG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TACCATGCTTAATGTCACACTACTAACAAGCGGCAGGACCAGTGTTTAAATGTAAATATATCTTATTTCAAAAT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TTGTTTGTTTTACCAAATTTTGTAGCTCCTTCCAAGACTCCCAACCTTCACCTTTTCTTTCTATCCCTAAGAAT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACATATGATTTTCACATACGAAGTTCGTTTATAACCTTTTGCTAATTAATTAGTGAAAAAAGATGCAATGAATT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TTGCAAAATGTCATGCAAAAAATGAAGCAGGAACAGACAATTAGGAAATATTAAACCATGGTTAGTAGCATTGC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATATCAGCATTGGTTTGATTGTAATTTCATTGTTCTGGACTCTCGCTTGTTTAGTTGGTGTCCCTGAGGCCTGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AGTCCTTCCAGGTGCTGAGAGTGGAGCTTCCCAGGCCTTCATCCTCTCCAGGACCTCAACCTTCCTCGTTCCAT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GTACAGACATAGAGCCCTTTCCACTTCCTTTTTGTAAGAAATAGTATTCTTTCCCACAGATGTCCAGCTCACAC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CAGCCTGCTGCTTGCCTTTCACTGACCCCTTCGATGGATGCTACGGACTTGGATCCACTGCCAAGGAAACACGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CACAGAGCAGTGTGTGGTTGGCATACTAAGCTCCACCAAGAAAGAAGACATCACCCAGAGTCATGCTGTATTAT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCAGAATACTTATGTGTCTCCATACCAGAGATTGACCACCCAAACTTCTTCATTTATAAAAAGCTTCTCCAAGT 4144
Query 73 ----------------------------------------------------------------- 72
Sbjct 4145 ACTTGATTGCTTGAAATTGGACTATAGTAGCTTCAAGAAACACTTATAAACATTAGCCAATTACA 4209
