Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_110279.3
- Aligned Length:
- 4781
- Identities:
- 65
- Gaps:
- 4709
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTGCTGTGGAAGCCCCATAGGCAGGAGGCCCCCGGGCAGCACATCCTGTCTGCTTGTGTCTGCTGCAGAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGTCCTTGCATTGGTGCGCCTCAGGCCAGGCTGCACTGCTGGGACCTGGGCCATGTCTCCCCACCCCACCGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCCTGGGCCTAGTGCTCTGCCTGGCCCAGACCATCCACACGCAGGAGGAAGATCTGCCCAGACCCTCCATCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTGAGCCAGGCACCGTGATCCCCCTGGGGAGCCATGTGACTTTCGTGTGCCGGGGCCCGGTTGGGGTTCAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTCCGCCTGGAGAGGGACAGTAGATCCACATACAATGATACTGAAGATGTGTCTCAAGCTAGTCCATCTGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGAGGCCAGATTCCGCATTGACTCAAAAGCTCTGGAGGCCCGGACTCCCCGGACACAGAGCCCGGCTCCTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTGGACCCACGCAGAGGCCGTCGGACAACAGTCACAATGAGCATGCACCTGCTTCCCAAGGCCTGAAAGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATCTGTATATTCTCATCGGGGTCTCAGTGGTCTTCCTCTTCTGTCTCCTCCTCCTGGTCCTCTTCTGCCTCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCGCCAGAATCAGATAAAGCAGGGGCCCCCCAGAAGCAAGGACGAGGAGCAGAAGCCACAGCAGAGGCCTGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGCTGTTGATGTTCTAGAGAGGACAGCAGACAAGGCCACAGTCAATGGACTTCCTGAGAAGGACAGAGAGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACACCTCGGCCCTGGCTGCAGGGAGTTCCCAGGAGGTGACGTATGCTCAGCTGGACCACTGGGCCCTCACAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGGACAGCCCGGGCTGTGTCCCCACAGTCCACAAAGCCCATGGCCGAGTCCATCACGTATGCAGCCGTTGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGACACTGACCCCATACCCACCTGGCCTCTGCACCTGAGGGTAGAAAGTCACTCTAGGAAAAGCCTGAAGCAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATTTGGAAGGCTTCCTGTTGGATTCCTCTTCATCTAGAAAGCCAGCCAGGCAGCTGTCCTGGAGACAAGAGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGAGACTGGAGGTTTCTAACCAGCATCCAGAAGGTTCGTTAGCCAGGTGGTCCCTTCTACAATCGAGCAGCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGACAGACTGTTTCTCAGTTATTTCCAGAGACCCAGCTACAGTTCCCTGGCTGTTTCTAGAGACCCAGCTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTCACCTGACTGTTTCCAGAGACCCAGCTAAAGTCACCTGCCTGTTCTAAAGGCCCAGCTACAGCCAATCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGATTTCCTGAGCAGTGATGCCACCTCCAAGCTTGTCCTAGGTGTCTGCTGTGAACCTCCAGTGACCCCAGAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTGCTGTAATTATCTGCCCTGCTGACCCTAAAGACCTTCCTAGAAGTCAAGAGCTAGCCTTGAGACTGTGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATACACACACAGCTGAGAGCCAAGCCCAGTTCTCTGGGTTGTGCTTTACTCCACGCATCAATAAATAATTTTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGCCTCACATCTGGCAGCCCCAGGCCTGGTCCTGGGTGCATAGGTCTCTCGGACCCACTCTCTGCCTTCACAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTTCAAAGCTGAGTGAGGGAAACAGGACTTACGAAAACGTGTCAGCGTTTTCTTTTTAAAATTTAATTGATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGATTGTACGTATTCAAGGTGTAAAATGTGATAATTTGTCGTACACGTACATTGTGCAATGACAGTCACAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATTCCTCAGCGCACCCATCGCCACAGATACGATACATTAGATATTCTGAACTTGCTCATCTTAGGACTTCACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGGTGTCAGTGTTTTCTGACAAATCACGTGTATCAGGAATGAATGAGGGAGGTGTGGCTGGGTGAAGGCAGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCCGACCCTACAGGTCCACATCTGCACATACATGCACAGGAATGCATGCTCTCACACACATGCATACACACAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCACACACACAGACATGCACATACACTCACACGCCCCAGGAAATCCAAGGAATCACTGAGCCTGCTGTTGGTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGCATTTCTGAGTATCCACCCTACCTGTAGGGTCAGATGTACTGATTGACACAGAAAATTACCCTATGTACCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTAGGAGGCGGCAGAATCTCATTTGGGTTAATCTGTGTTTGTCTTTAAAAAACAAAAACAGGCCGGGCATGGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCCGGGTGTGGTGGTGGGTGCCTGTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTCCCAGCTACTCGGGAGGCTGAGGGAGGAGAATGGCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCAAAAAAGAAAAGAAAAGAAAAGAAAGATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAAGAATTCAGCAAAAACTCAGCCAGCTCTTTCTATGGGGCAGTTGCTAATTTAGTTCTAGGCAAACGTGGAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACATTAAATTCTCCTACAAACCCTCCACAGCGTGCTCTATTATTTTCCTCATTTATAAAAACAGAAACTATGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCGAGACATGAAGTAACCTGTCCAAGGTCGGCCAAGTCTCAGAGACAGGGGCTTCAGACCCACCTGAGGCTCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GACTCCACATTATGAACCCCGGGATGGGCTGCAGCTCGGTCTGCTGGGAGGTTTCTGTGCTGGTTCAAAGAGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGTACCTGACTGGCCTACCCAATTTTAATTTGTACTGAGCTTTAATTTTCTATTTGTGCTCAGGTTTAATTTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCCTGGGATCTGCTTCCCAGTGCTGTACTCTGTATCTTTGCTTTCTTGTGTGAACATTGTGACCGATTTTCCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGTTCTTCACGTGGGACACATTCTCCCTGCTCTGTCTGTCTCTGTCCCTGTCTCTCTTTCTGTCTTTCTCTCTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTGTGTGTCTCTCTGTCTCTCTCTCTCTTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGAGTGCAATGGCACAATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCT 3108
Query 1 -----------------------------------------------------AT--------------GGGGT 7
|| ||||.
Sbjct 3109 CCTGAGCAGCTGGGATTACAGGCATGCACCACCACACACGGCTAATTTTTTGTATTTTTGTTAGAGACGGGGGG 3182
Query 8 TTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------- 72
.|||||||||.|.||||||||||||.|||||||.||||||||||||||.||||||||||||||||
Sbjct 3183 CTCTCCATGTTGCTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTCCT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GGGATTACAGGCATGAGCCACTGCGTCCAGCCGTCTTTGTCTCTTTTTCTACATCTCTGTCTTTCTTCTCTGGT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TGTTTTTCAACCATCAGCTGGGTGTTTTCTCCCATAACGTCTTGTTTGTTTGACTATGAGGTTGACAGGTGGGT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ACATGAACTCTATAGCAGAAGGTGGACAGTCTGCACATAGCAGAGGATGGGTGAATTTTTCTACCCCTTGCAGA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GCACAGGAGAGCTGAGCAGATGCCAGTGTCTGCTCCAGTGTAAGGAAGTCCAGGAAGTTCAGGTGGTGAGGTCA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CAGTGGAAAGCAGGACAGATAGAGTTTAGGGGAAATTAAGCAAAAATACCACACTGTTATTTCTTGACATATTA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GTGGAAAGAGGAAGGGCCCAGAGAGAAGACAGAAAATTAGATGCAGGGGCTTGTTTTTTCTCTTGACTTGCCAA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CCCGCCCAACGCAGGGGCCAGAACTCAGGGTGGTGAGATCTGGGAACATTGCTGTGCGGAGAAGATGTCCCTCC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGCTGCACGGGCCCCCAAGCACCACCTGGGGGAAGAGCCATGTTTAATTCACCTGGCAGTGCAGTGTGGCCAGG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CAGAGAGGGAGGGCCTACCCTGTGCTTATGATCCCACCCCAGTTCCCCTGGGGTGTGCCCTGGCGGTGAACACC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGGAGGCTGCAGTGGGGCCCAACGTGAAAGGGAGGAGCAGCCTCACCGGGGCCAGATGGGGCAGCAGCAGATAT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TCACAGATGTCCCTGTGAGTAACCAGGGCAGAGGCCAGGGGTCTGGCCTTCCCTTTCTTGGAGCCCTGGGCCAG 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CTGGGCAAGGCGTTGAGAGAAAGATTACCCGGTGACCTTTATCAAAGCAGAGTAAGGAGGGCTTTATTCAGAAC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CATCACTGTAGGTACCAGGACCCCAGCGGTGGGATTTTGTAGTAGGGGAAAGAAAATGGGCTCGACGTTGAATA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CAGCATGAACAAGTGAGAATGTTTGTTATACAAACTATAGGGTGGACTTTTTTTTTCTTTTTTTTAACTTTTTT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTACCTTTTAGTGTAAAACTGAACATAGAAAATAAATTCATGAAGAAGGGATATTTTCTGAGGGTGTCCAGGGC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TGCCCAACACCTCGTCTACCTTCTCTGTCATAGCCCCATTTAAAACACTCTCTCTGGATGAATACACCAAACCT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CACAGTCTTTGCTCTCTTGCTAGGAAGAGGAGCAAGAGCGTGTTTCACTCTTGGCTCCTGCTTACACACCTGCT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GTCCAATGGAAACTACTACTTAAGACATTTAAAAATAGTTGTGGTGATAGCATGTTGTGTTTTGGTTGGTGATG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CCAGTTAGTCTCTGAAAACTTTCTGTGATGAGTGTAAAATTCTACACCTTAATCTCCTTTCTTGTAGGATCTGG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GAAGCAGTATGCACTTGATTGCACCAAAGATTTTACGTTCATAGAAAATTTCTGGCATCTGTGTGAAGAAAGTA 4736
Query 73 --------------------------------------------- 72
Sbjct 4737 AACTATATCTTCCATTTAGACAAATAAAATATCTTTTTGATAAAA 4781
