Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_110802.1
Aligned Length:
5081
Identities:
65
Gaps:
5009

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATTGGAAGGAGGAGCAGGGGGCCTGCCCTCCACCCCCACACTCTGGGCCCGAGACTCCTCGCTCCTCCTCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCGCCTCGCCTCGAGTCTCTGGCTCCGACCTCTCTACTCCCTTGTTTCTGACCTGTGCTCCGTGGTGTCTCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTCCCCCTGCCGCCAGGGGAAAGGAGGAACATCCCTCCCAGGACTCACTCACACCTATTCTCCAACTCTGCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCTGCTCAATTCACCTGATGCTCTGCCAGTGGATTGCTGATGTCTCTACATTGATTCAGATTTGCACCCACAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGAAAATGGTCAGCAGGCAGGGACCCTCTGTCACCACAGGTGGAGGAAGAGGAGATGAAAGAGCCTTGTCTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACCCTGGAGACTGCAAGAAGGCCCTTGCCAGATGTGGGCCCCTCCATCTTGGACTTCCCAGCTAGCCTCCAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACTGGAAACTACCCAGACTGTGTCCTCTCCCTCTTACTCTCCTAAAGGAAGACAAGGAAGACAATGACAAATGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGTTTGCAGCAAAGCAACACCAACAGCCAACTTGATGCTCAAGAGAGAACGCTATGCCTCTTCCTCATGGTTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGTGCTCTACACATTCTGAGAAACTTTTCTGGTAATAAACTATAGAAACAATGAGACTGTGCCCATGGGAGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCCCATCTCTACAAAAAATACAAAAATTAGCCAGGCGTAGTGGTGTGCACCTGGATTCCCCAGCTACTTGGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCTGAGATGGGAAGATCACTTGAGCCCCGGAGGTTGAGACTGCAGTGCGCCATGATCACGCCACTGTACTTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCTCAGTGACAAAGCGAAAGCCTGTTTCAAAAAAAAAAAAAAGACAGAGAGAAACGGGCTGGGGACGGTGGTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CACACCTGTAATCCCCGCACTTTGGAAGGCCGAGGCAGGTGGATCACTTGAGATCAGGAGTTCGAGACCAGCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATGAGCAAGGCATGGTGGTGGATGCCTATAATC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAGCTACTCAGAAGGCCGAGGTGGGAGAATCACTTGAATCCCAGGAGACAGAGGTTGCAGTGAGCCGAGATCG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGCCACTGCACTCCAGTTTGGGCAACAGAATGAGGCTCCATCTCAAGAAACAGAAAAAGGGAAATGATCCCTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGTACACTCTTTTGTTGTAGTTTTTATTTGCATTTTGCTAACGATTAGTGATGTTGAGCACCTTTTCATGTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTACTGGCTATTTGTTTTCTTTTTTTTTTTTTTTTTTTGGAGCGATACCTATTCAAGTCCTTTGTTCATTTTTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTTGCTTGGTTTTTGTTGTTGGTGTTGAGTTTTTTAGGAGCTGCCTCTATATCCTGGATATCAATTCCTTATC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGATATATAACTTGCAAATATTTTCTCCCATTCTGCCAATTACCTTTTGAATTTGTTGATATTGGTTTTTTGAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCACAAAGTTCTTAAGTTTTCATCAAAGCTAATTTGTCTATTTTGTTGTTATTGTTGCCCCCATCTTTGGTGTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGATCCAAAAAAATTATTGCCAAATCCAGTGTTGGGAAGCTTTTGCCATATGTTTTCTTCTAAGAGTTTTAAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTTTAGGTCTTACATTTAGGTATTTGATCCATTTTGAGTTAATTTTTGTCGATAGTGTTAGGTAAGAGTCCAAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTATTCTCTTACATGTGGATATCCGTTTTTTCCAGCACTATTTGTTTAAAAAACAAAAATCAAACAAACAAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACCTGTCCTTTCCCCATTAAATGGTCTTGGCATTCTTGTCAAAAATCAGGCTGGAGTGCAGTGGCATGATCTCG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCTCATTGCAACCTCCACCTTCCAGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGAGATTACAGGTGTGCACCA  1924

Query    1  ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC  40
                                              |.||||||||.||||||.||.|||||||||||.|||||||
Sbjct 1925  CCACGCCCGGCTAACTTTTTTATTTTTAACAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC  1998

Query   41  TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------  72
            ||||||||||||||||.|||.|||||||||||                                          
Sbjct 1999  TGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAATGTGCTGGGATTACAGGCATGAGCCACCGCACCTGGTCT  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  GATCAAGTTTAAGACTGCATTGCACCACAGCACTGCAGCCTAGACAACAGAGCAAGACCCTATGTCAAAAAAAA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  AAAAAATCATTTGATCATAGGCCAGGTGTGATGGTACATACTTATAATCCGAGCTACTCAGGAGGGTGAGGTGG  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  GAAGATCACTTGAGCCCAGGAATTCGAGTCCATCCTGGGTAACATAGCAAGACCATATCTCTAAAAAAATTAGA  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  TAAATAAAAAAAATAAGAAATCACTTGCAGACCAGGCACAGTGGTTCACGCCTGTAATCCAGCACTTTGAGAGG  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  CCTAAGTGGGCGGATCACTTGAACTCAGGAGTTCGAGACCAGCCTGGGCAACGTGGTGAAACCCCATCTCTACC  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  CAAAATACAAAAAAATTAGGCAGGCATGGTGGCTTACACCTGTGGTCCCAGCTACTCAGGAAGCTGAGGTGGGA  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  GGATCGCTTGAGTCCAGGAGGCAGAGATTGGAGTGAGCTGAAATTGTATCACTTCACTCCAGCCTGGGTGACAG  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  AGCGAGACCCCGTCTCAAAAAAAAAAAGAAAAGAAATCACTTGCTCATGTGTGTAAGAGTTTACATGAGGGCCT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  CTGTTCTATTTCATTGGTCTATACGTCTGTCTCTATGCCAATACCACTCTATTTTGATGAATGTAGCTTTGCAG  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TGAGTTTTAAAATCAGGAAGTATAAGTCCTCCAGCTTTATTCCTTGTTCATATTTCAACTTTTGTGATAATCAT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  TTCCTTGCTTTTCTTTATATTTTTATCACCCATGTGTGCACCGCCTACAAGCAGAACCTAACAGGACAGTAATG  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  GAGGCTAGGGAACTGGTTTGCAGAGTCCCAGCCCCCTTCCAACATCAGAGAGCAGAGAAAATAAGAATGAATTT  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  GAAGCTGAAAGTCAATAAGCAAATAACTGGCATTATCTACCCCTTTTTTCTATGCAGTAGTTACACATCTATCC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  ATCATATTTGAATAATAACAGCTTCATCCCTTTGCCTAATAGATGCAACTGTCCTTTGCTCAAATGAAGATGCT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  CTGGGGCCCTCCCCCAAAAGCAGAGACGCAAAGTCTCTACAGCAATGGGATCCCTTTCCGTGTGATGTGAATTC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TCCTAGTTCAGCCACATGTCCTCTAGAGTATTCTGCAACCTAAATTATGAAGGTCATCACCAACAACAATCCTC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  ATAAAAAATAAGAGAAAAGAAGGAGAGGAAAGTTAACCAATATTTAAAGAGTGTATATAACAAAACAAGCAAGA  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  GAAAACATGCCCATGGCTTCTACAATCCTTGCTTCTATATCTGGTCAGAAGCTGATATTATAACTTTCCTCTTC  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  CATTACCCTTGAAGGGTTCAAGGGATTCTCGTGCCTCAGCCTCCAGAGTAGCTGGGAATACGGGTGCCCACCAA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  CCACCACACCTGGCTAATTTTTGTATTTTTTTTAGTAGAGACAGGGTTTCACCATTTTGGCCAGACTGGTCTCG  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  AACTCCTGACCTCAAGTGATCCCCACCCACCTTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGC  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  CTGGCCCCAAATCTGTATTCTTTATTTTTATTATTGTTATTATTATTATTGTTGTTTTTTTTTTTGAGACGGAG  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  TCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCAATGCAACCTCCGTCTCCCGGGTTCAA  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  GCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGATTTACAGGCGCCCACGACCATGCCCGGCTAATTTTTGTA  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  TTTTTAGTAGAGAGAAGGTTGCACCATATTGGCCAGGCTGGTCTCTTGGCCAGGCTGGTCTCAAACCCCTGACC  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  TGGTGATCCGCCCATCTTGGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACCACGCCCGGCCCCCAAACC  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  TTTATTCTTAAAATAAAGGTTTCAAGAATAAACCTTTATTCTTGAAATTAGCATTCTACAAATTGGAATCCTCA  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  GAACTGTATTGCTCTTTTTTTTTTAACTTTTACTATTGGACACGGAAATAGGACATGGCACACCAGGGAGTCCC  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  CTGGGTTCCAGACATAGTCCTCCCTGCCTTTCTTTTGGAGTTAGAACCCAGCTTACCCTTGGCATTTGGGATCA  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  GTCATCCCAGAAGGTAACCCCTTTTTTGCCCTGAGCTCAGGTGAGAGCCTTATCTTCCAGGTAGTGGAACCATT  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  GCAGTATCTCCTCGTGAAAGGATTCCTCCCTTAGTGTGGCAGATGCTGGCAGTGCCCTCCCATGTTCCTGAAGC  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  TCTTGGGTTCACTGGATGAACTTCCAGCTGCCAGAACCTGCAGCTCTTTATCTAAGGACTCTCTCTGGCCACTG  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  GAGCCTGCTGAGCAGGCTGAAAGTTCTGGGGAATTATACTCCCAGCCACAGCAACCTTCAGCCAATCACCGATG  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  GGGATCGGTGCGTAAATAGCCAGCTTCCTCATCCCTCAGGTCCTGCAGCAAACATTATGACTGGCTCCCTGAGT  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  TCCTTCTTAGGATTAAGCTCTGGTTGTCCACGTGTTTTGTTTGTTTGTTTGTTTGTTTTGTTGTTGTTGTTTTG  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  TTTGTTTTTGAGACAGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAATCTTGGCTCACTGCAAC  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  CTCCGCCTCCTGGGTTCAAGCAATTCCCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGCCATGTGCCACCA  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  CGCTCGGCTAATTTTGTATTTTTAGTAGAAACGGGGTTTCTCTATGTCGGTTAGGCTGGTCTCGAACTCCCGAC  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  CTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCGGCCGGTTG  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  TCCATGTTTTTAACTTGCTTGATAACACACCCTTTATGAGCCTCCTTTCTTTCCAATGTCAGTCTCCCACTGGC  5032

Query   73  -------------------------------------------------  72
                                                             
Sbjct 5033  TTGCTTGGTATTCCTAGCATCGCTTTTCAAATAAACACTTGTGTTTCTC  5081

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