Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_135911.2
Aligned Length:
3799
Identities:
63
Gaps:
3727

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTGCACCACCACGCCAGGCTAATTTTTGTA  814

Query    1  ------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCAC  62
                        |.|||||||..||||||.||.|||||||||||.|||||||||||||||||||||||||||.|
Sbjct  815  TTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGC  888

Query   63  CTCAGCCTCC----------------------------------------------------------------  72
            |||.|||||.                                                                
Sbjct  889  CTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGAATA  962

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  963  TACTAACAAACTGCAAGGTGATGCGGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAG  1036

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1037  AGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCT  1110

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1111  TCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTTCCTCTTTAGAGAGCAAAGACC  1184

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1185  ACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGG  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  AATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACA  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  GGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAA  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  ATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTAT  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  AGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCC  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  ATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATT  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  TGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACC  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  TCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCA  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTA  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  TACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGT  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  TGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  CACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGATAGC  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  TTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAATGT  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATTCAT  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  AGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTTCAG  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  ACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCT  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  TTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATAACA  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  CTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAGCCT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACTCCT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATATTT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  CACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAATAT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  TCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGTAAC  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  ATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGCTAA  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  TGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAATGCA  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  ATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAAGCA  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  CTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTG  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  GAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTGGCC  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  AAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACACA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  GTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAAT  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  GACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAG  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  CTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACA  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  TTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAATTAT  3774

Query   73  -------------------------  72
                                     
Sbjct 3775  CCATTAAACAAACAAAACTGTGCCA  3799

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