Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_138033.1
- Aligned Length:
- 3502
- Identities:
- 63
- Gaps:
- 3430
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTCCACCGCCCGGTGGCGGGTCACGTGACTGCGTCTCCCCGCCCTCTCACCCCGCTGCCTCTAGGTTCTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGAGAGATAAAATGAGAAAATGGAGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAAACTCAAGAAATAGTGAGCAAATTGTGGAAGTTGGAGAAGAATTAATTAATGAATATGCTTCTAAGCTGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATGATATTTGGATCATATATGAACAGGTGATGATTGCAGCACTAGACTATGGTCGGGATGACTTGGCATTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGTCTTCAAGAGCTGAGAAGACAGTTCCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCATGAGATTTGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATGGAAAGGCTGCAAGAAAGCGTAAGATTGCCATTCGAAAAGCCCAGGGGAAAAATGTGGAGGCCATTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCTGAATGAGTATCTGGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTACATCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAACATGACTATGCAAAAGCAGCCTTTTGTTTAGAGGAACTAATGATGACTAATCCACACAACCACTTATACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCAGCAGTATGCTGAAGTTAAGTATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGTATTTTGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGCATTGAAACTGAACAACAGAAATATGAGAGCTTTGTTTGGACTTTATATGTCGGCAAGTCATATTGCTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAATCCAAAAGCAAGTGCAAAAACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCTTATCAGTTTGCAGGTCGAAGTAAGAAGGAAACCAAATATTCTCTTAAGGCTGTCGAAGACATGTTGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATTGCAGATCACCCAGTCTTAAGGTTTCAAAAACTCTTTGACATTAGATTTCACAACTGCACAATTGAACTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTGGCCTGTAACTTATTTACTAAATGCTCAGTGCTATTTATATACTACAGTAATTTTCTGTTAAGAAGGCAGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTAAAGAATGTGTTTATATAAACCTAAAAATGCCTTTTACTGCTAAGTGGGGAGATGGGGGAAATCCATGGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAGATTTAAGACTTATTGATTGTACATCAGTCTCTTCATATCACATATACATGTATATATATAAAACTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTAGTATAACCTTGTTAAATAAACCATGATGATTTATTAAACTTGCATATGAAGATTCTAACTTCATTTTGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATACTCACAGTGGATATATTGTTTAAGAACTCAGTTTCTAGTTAACTCCTTACTGGTGATAGCAAAGTCACAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATATGTAGCTGACCGAAGCAGATTATTTTGACTTTGTTTATATTGTCGAATTGGATTTTGCTGTACATTCCAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGCTATTTGAATTGTTTTATCTGCTGTAATATCCTTCTGATGAATCTTGCTTAAAATATGTCATTCTCCAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCAGCAATATTTCTTTGTAAAATTTTTGTTTTGATATAGGACATAATTGAGATTTTTACATATAAAATGCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAGATAAATATGTGTTACGACACTTTAACTTTTATGCAAGTTATATTTATTGAATCCTTTAATAGTAAATTACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAAAGAATATTAAAGAATCATAAAGAGTAGGGATTAAAGGGGTTGTAGTTATTTTTAATTTTGAAAAAAATAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAAATTAAAACTATCCTTAGAAACAAAAATGTTAAAATTTTCCTATTCTATCATTACCTTAGTTAGAATTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATTTTTCTCTTTTCATAATAAACAACCATTATGCTACCTTCAACAGTATTTGACATGTTTCAACAAAATAGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGACTTGAAAGTTAAATTTCATTTAGACACAAATCAGTTTTTAAAATAGCAACTGTTCACCGCAAATATTTAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTATTTGTTTATAATAAATATATTTAAATTTATTTTTACTAAAAATATACAGAGGCATCTACAGACTTGTCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCTGCTTTGGACAAGTGGGGATTGTGGAGGAATTGACAATCTAGAAGTGTTTAGAAAGAAAAGTATTGTCAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCAGCTTCTTTTAACCTTTTGAATAGTTCTGCTAATAAATTATTCTCCATATCTAGTCTAATCTTTCATATTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGTCATTTTCGTTTTATTCTGCCACGAGTAATAGGCAGCTGATTAATATATTCTGTGAAAGAACTCTTCTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGAAGGTAATTCTCTACTAATCTTTATTACCACAAAGATCCCGTCTTTGTACACATGAAATTAGTAACTGCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTCAACATGATGAACCATTTGAAATTTACATTTTCTGTAAAGAAAATAGTGCCTGCACGTTGTTTCACTACCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTCCCCTTCAAACCTCCTCCCCGTCAGTCACTGGATTAGTGTTTACTCTAGCAATTATATTTGTGTAATAAGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AATTCAGTGCCTCTTATAGCTGTCTGCCTTAGTTTCACTTTTTTTTTTTTTTTTTTGAGACAGTCTCGTTCTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CACCCAGGCTGGAGTGCAGTGACGTGATCGCAGCTCACTGCAACCTCCTCCCGGGTTCAAGCGATTCTTGTGCC 2590
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 2591 TCAGCCTCTGAGTAGCTGGGACTACAGGCATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGG 2664
Query 5 GGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------ 72
||||||.||||||.||.||||||||||||.||||||||.|||||.||||||..|||.|||||||||||
Sbjct 2665 GGTTTCACCATGTTGGCCAGGCTGGTCTGAAACTCCTGGCCTCAAGTGATCTACCCGCCTCAGCCTCCCGAAAT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GCTGGGATTACAGGCATGAGCCACTGAGCCTGGCCAGTATCACTTTATTTTTTCAAAATTTTAATAACTTCTTT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CCAAGATTTTATATTTGTTAAGCACATTGCCAATCCTTAGTTATTTATAAACTTCAACTTAAATGTACTGATAA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TCCCATTACAGCAGGCAGTTGCCTACAGCTATTACCTTTATTTCTTCTTTAGCAGTACCTTAGTTTGATCTGAT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGTGGCAAGGATCCCTCTTCCTCAAAGAGATTAGGACCTTACCCCAACTCCAGAGGTTGCACCTTCATTGATCT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GAAACAGAAGTGGTAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAAGGAAATCA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 ACCATCCATTCTGTCTCTCTATTGTGGTAGCTACTAACCATATGTGATATTGAGTACTTGATATGTGACTACTG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CAATTGAGAAATTGAATGAAATGAACAGAACCCTACTGAGAAGGGCTTTCCTTTCAAATTAAAAAATCAGAGCT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TTGTGTGGTAACAGTCATTGCCTCTTTCTCCTCTTTCTGGCCAACAGCATGCCTAAAGGTGCAGCTGCCATCAA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 ACAACCATGAAACAGCAAATGTGAGAATGAAAGTTACATTTCAGAGATAGAACTGAAGGAGGATTAAGGGGATC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CTGGGTCCCTGATATGGCATTGTTGAACACCCAAATCAAGATGAGCAATTGCCAAACTCCCCAATTATTAAATG 3478
Query 73 ------------------------ 72
Sbjct 3479 AGAAAAAATAAACTCCAGATTGTT 3502
