Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_146295.2
- Aligned Length:
- 4892
- Identities:
- 64
- Gaps:
- 4820
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAGCCCCAGCTTTCACAGCCATCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCAGGTCAGCGCTGCCTGCCAACGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCGATCTCTACGTGGGGAAGACCAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACCATTGGGGTGGACTTTGAAATTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGCTGGGCAGGAGAAGTTCAAGTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGAAGGACCTTCTGGGGCCGCATGTGAGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAGTACTGGTCAGTGTCGGCCAAGACTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTAC 2294
Query 1 ---------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGG 29
|||||||||||||||||.||||||||||.
Sbjct 2295 AGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGC 2368
Query 30 TCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------- 72
|||.|.||||||||.|||||||||.|.|||||||||.||||||
Sbjct 2369 TCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACC 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 ATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 GCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAG 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACA 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 AAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 CAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 ACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCC 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCC 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 AACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGAC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 AAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCAC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 AAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 ATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 CAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAACA 4884
Query 73 -------- 72
Sbjct 4885 AGCATGTA 4892
