Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_147501.1
- Aligned Length:
- 4392
- Identities:
- 63
- Gaps:
- 4323
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCGCTATGGACCCCGCCTCGCGGAGACGCCTGGCTCGGGCCTTGTCCCCAGTGAGCGGCTGGAGCGGCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGTCGCAGAGCCTCCGGGACCCCGAGGAAGGGCGCCCCTCGGAGTTGCCCGAGGCCGGGCCCGGCGTCCACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCCACTCGCCTCGCCCCTCCCCGGCCCCGCACCGCCCTCCACCCCGCCTCCTTCGGGTTCCTTCTGCGTCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGAGCCTGCGCGCCTCCCCCGGACGGCCACGGACTCGCAGCCTCGGCGAGGACGCTGCCTGCGTCCCGACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGACCTCCCCGCGTGGCTCCCGGCGAAGCCCAGCAGCCGGAGGGTGCCAGGTCCGCCTGACGCGCCCCTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACGGGAAGAACGGGGCGGGGGTCCAGGAGGGACGTAAGCCGGGCTCCCCCGGCGTGTTGATCCGAACCCGCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGAAAACTTGCGCAAACCAAAGGAGGGAAGAGTCAGGCAGCCCCCAGCCCCCCAGGGAGGCCCAGGTGAAAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGACGCCGGCCTCGCCTCTCCCGGTGCGGATGATCCCGGCACTCCCACCCCCGCCCCTGCTGCCCCGAGTTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTCCCTCAGCCCCACATCCTCTCTGGTCATCTAAGTGGACTGCAGCTGCTCAGGGAGCATGTCGCGAAGGATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAAGGACAGGGGGTCTGCTTCCCCAGCCGCCCTCCAGACCCCCAGGGCTGGTAGGGGCCGGCAACCCTATGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCAACCTGGCCTGCTGCAGGTGAGGGGGGCACACCAGGGTAACACAGGAGCAGGAGGGGGAGAAAGCCTGGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGCATCCACCTCATAGGCACCTTCCTTGTGTCCAGGGTGCAGATGCCAGGGCTCTGAGGCCCTGAGGTCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTGGGGCGAGGGGGCTTCCTCCATCCACTGCATCCACTGCCCGGCTGAGTCTAGAGGCCACTGAGCAAGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTCCAAAGCCAGGCACACTCAGGCCCTCACATGGTCACGGTGCTTATGCTCTGGGCCAGCCTGGATTGCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCCTAGCTGAGATTGGGATTCACAGGGTCTTCCAGTTCCCCCTTTTCTTTCTCTACTGATTGAGAAACACAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCTTTGATTGCTCTGGGACCTGGCCATTGCGTGTTCCCTGCAGCCTTGAACCCAGTTCAATGGGGCCGGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTCCCTGATAAAGCTGTTTAGGTTGCTTGAAAACACAATCAACCCTATTGCTAAACACGTAGAAACTGGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCCCTGAGTCCAATCCCTTAAACTCTCATCTAAGCTCCATAGCCAGAGTCCCTTGCTGCAAATGTACCTGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGCATCCCTTGCCTCATCATCGATCCCAAGAAAGCTGAAGCTCCATGTGAAAATTTCCGGAAGAAATGCTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGACTGATCACCCTGGCGTTTAGAGCTTCTTTCCTTGGAATCCCAACCAATTCCATCGCGGGACTGTTTGGGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTCTTTTGAGGCAACTCCCTTGCTGCCACTTTTGGGGCAACTCTAGCCTCCTCATATTTGGCCAGATAGAACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTCCAAGCTGTAAATGTTTCCAGGAAAAAATCTCAACTACAAAGACACTTTCAAGGTGCTGCATTTCCAACAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CACTCTCCGTATCCGAGTGGACAGCCCAGAGCAATGGTGCTTCCAATCCACAGAGCCCCTCCACAGGTCCCTTG 1702
Query 1 --------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCA 48
|.||||||||||||||| |.||||||||||.|||||||||||||||
Sbjct 1703 CCATCTGCAGACACCCACATCTCAAGACGGGGTTTCTCCATGT---TGAGGCTGGTCTCGAACTCCTGACCTCA 1773
Query 49 GGTGATCCGCCCACCTCAGCCTCC-------------------------------------------------- 72
|||||||.|||..|||||||||||
Sbjct 1774 GGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCGCCCGGCCTAGGATTTC 1847
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1848 CTCCTTTGACGATGAATAGTTCTCCACTGTAGTCTCACTCTTTCTCCCAGGCTGGAGTGAAGTGGCGTGCTCTC 1921
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1922 AGCTCACTGCAACCTCCACTCGCCGCTCCACTCCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGC 1995
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1996 TGGGATTACAGTCCGGCTCTGTCATCCAGGCTGGAGTGCGATGGTGCCATCTCGGCTCACTGCAACCTCCGACG 2069
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2070 CCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTGCAGCCAGAGACCTCCACGGCCGGC 2143
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2144 AACGCCCCTGCGCAAGGCCTCACGGCTCCAGGCTGTTGGAGGTACCTGCCCACTCAACCTGGGCTGGCTGTTGG 2217
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2218 AGGTACCTGCCCACTCAACCTGGCGGGCTGTGCGTGGCTTGTGCTTTGGGCTGGATCCCACGCTCGCCATGGGA 2291
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2292 TCTGCACTCGGACTGCAGCTGGGCCGGGCATGCCATGACCTGCTTCCACCTTGGGTGCTGACGTCTGGATGAGA 2365
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2366 GGAACATGGTGGCGCCTGAAAAATCTGGAGACACCAGAAACCCTGGATCCCCAAAGGAAGTGTTATTCCCGCTG 2439
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2440 TCCGTGCTGTGGGTGTGAAGATGTGTGCTGCACATCCCAGTTTCCAGCACAGGACAAAGACTCAGAGAGGCACC 2513
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2514 TGCCAGGAGTCTCAGGTGATGGAACCCAGTGGCGGGCATGTGGGCAGCTGCCCCAGGTGGAAGGGATCGTGGCA 2587
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2588 CAGCTCTTGGTTCCCCAGGCTGGCCCTGACCTTCGTGCTTTCCTGCCCATGGCCCAGACTTCCGAGCTCCATGT 2661
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2662 TGGGGATGCTCAGGGACAACCCTTCAGCCTCCCCCACCATGTCCCGGCTACTGCCCAGGATTCTTGTTCTCTGG 2735
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2736 AGGGTGGATCCAGCCCTCCCCATCTTGGTGCCCTACCAGGGCCAGGCTTCCCATGGCTCTTTCTGCAGCCCCTG 2809
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2810 GCACAGACTGTGGGGCGCACAGCCCGGGGAGCAGTGGGCCTTGGAGGGGCCAGGTCTGCATGTTCCCACCCCCA 2883
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2884 TCATGGAGTTTGACACACCAGTGGGCAGGTAACTCAATCCCCCCTCACCTTCTCTTCATCTGTTAGGGGTGACA 2957
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2958 GGGTGCTCCCCGTGGGGCCAAGAGGATGCAGCACCCCCACCGGCTACCCTTCCGGCCACACCCTTCTCTCCTGG 3031
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3032 CCCACCTTCTGAGCTGGCAGGGCTTCCTTCCTGGCTTCTGCTGGGCAGTGTATTAGGGTCCTCTAGAGAGACAA 3105
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3106 AACCAATAATGGAGTTTAGGAGAGGGGATTTTTATTTGTTTGAGACAGAGTCTTGCCCTGTCACCCAGGCTGGA 3179
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3180 GTGCAGTGGCTCGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTGAAGTGATTCTCCTGCTTCAGCCTCCC 3253
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3254 GAGTAGCTGGGATTACAGGCACCCAGCACCACACCCAGCTACTTTTTGTACTTTTAGTAGAGACGGGGGTCTCA 3327
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3328 CCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTACCTCTGCCTCCCAAAATGCTGAGA 3401
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3402 TTACAGGGGAGAGCTACCGCGCCCGGCCAGGAGAGGGGATTTATTAGGCGAACTGGCCCACACACTTATGGAGG 3475
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3476 CTGAGAAGTCCTCCCATAGGCTGTCTGCAAGCTGGAGACCTAGAGAAGCTGTAAGTGAGGCTCAGTCCAGGTAA 3549
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3550 GAAGGTGGTTGAACCAAGGAAGCCAGTGGTGTAACTCTCATTCTGAGGCTGACTGGCCGAGAGCCCTGGGAGGC 3623
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3624 CTCTGTGGCAAGCCTGAGTCCAAAGGCCGAAGAACCTGGAGTCCTGATGTCCAAGGGCAGGAGATGGGTGTCTC 3697
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3698 CCTCCAGAAAAGAGAATTTGCTTGTCTTCTCCCTTTGTGTTCCATCTGGGTCCCCAACCAAGTGGATGTGCCTG 3771
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3772 CCCACGCTGAGGGCAGATCTTCACTGAGTCCACTGAAAACATCCTCACACACTCAGAAACAATGCTTCGCCAGC 3845
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3846 TGCCAAGTACAGTGTGTGTGCCTTAGTCCCAGCTACTCAGGAGGCTAAGGTGGGAGAAACGCTTGAGCCTGGGA 3919
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3920 GCTGGAGGCTGCAGTAAGCCATGATTGTGCCATTGCACTCCAGGCTGGCTGACAGAGAGATCCTGCCTCAAAAA 3993
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3994 AAGAGATAGATAGATAGATAGATAGATAGAGCTCCACCAGCCATCTAGGCTTTTTTTTTTTAAACAGGGTGTCA 4067
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4068 CTCTGTCAACCAGGTTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTTGACTTCCCAGGCTCAACCCAT 4141
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4142 CCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGCGTACAGGCACAGACCACGATACCTGACTTATTTTTA 4215
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4216 AATTTTTTGTAGAGAAGTTTCACCATGTTGCCCAAGCTGGTCTCAAACTCCTGGGCTTAAGCAAACCTCCCACC 4289
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4290 TCAGCCTCCCAAAGTGATGGGATTACAGGCAGGAGACATGGCAGCCAGCTAAGGCTCCCTGTACCCTGTTAGTC 4363
Query 73 -------------------------- 72
Sbjct 4364 GGCTTTACAGCACCTGGAATTGACCG 4389
