Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_157849.2
- Aligned Length:
- 5198
- Identities:
- 65
- Gaps:
- 5126
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCGCCTCCCAACCGTGAGGTGTTGGGTTTGGGGGACGCTGGCAGCTGGGTTCTCCCGGTTCCCTTGGGCAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGGGTCGGGTTCAAAGCCTCCGGAACGCGTTTTGGCCTGATTTGAGGAGGGGGGCGGGGAGGGACCTGCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGCCGACCGGTAAGCCCGCCTCCTCCCTCGGCCGGCCCTGGGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGTCCGCCGGGCAACTCCAGCCGAGGCCTGGGCTTCTGCCTGCAGGTGTCTGCGGCGAGGCCCCTAGGGTACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCGATTTGGCCCCATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGCTGGTGGTGATCGTCGTCCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGTGGCCGAGCTGCAGGGCCAGGTCCAGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCTTGCTGTTGGTGGACACGCACAAGAAACAGATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTGCAGGCCAGAGAGGGCCTCGGGAAGAGATGCGAGGATGACAAGGTTAAACTACAGAACAACATATCGTATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGATGGCAGACATACATCATTTAAAGGAGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAAGACCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCAGGACTATAGGAAGAACAATACTTACCTTGTGAAGAGGTTAGAATATGAAAGTTTTCAGTGTGGACAGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATGAAGGAATTGAGAGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTTTTTAGAGGAACAAAAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAGACCCAAAAGATTCAATCAAATGATGGAAAGGAATTGGATATAAACAATCAAGTAGTACCTAAAAATATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAAAAGTAGCTGAGAATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAAGAACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATCAAAAGAGGTGGTGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGCATCCAGGAAAAGCTTTTAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGACAGAGTCTCGCTCTGTTGTCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTGAAGTATAGTAGCGTGATCTTGGCTCACTGCAACCTGCGCCTCCTGGGTTCAAGCAATTCTTCTGTCTCA 1258
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 1259 GCCTCCCAAGTAGCTGAGATTACAGGCGCCTGCCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGG 1332
Query 5 GGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------ 72
||||||.||||||.||.|||||||||||.|||||||||||||||||||||||.|||.||||.||||||
Sbjct 1333 GGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGT 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 TCTGGGATTACAGGTGTGAGCCGCAGCACCTGGCCAGGCTTTTAGTTTTTAAATATTAGGTAGAGGTAATCTAT 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 TTGTAAGATAACAGATTTTCTAGAACAGAGGCTTCGAATGGTGGTTGCATATTGGAATCTCTGGGGAGCTTGAA 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 AAAAAAAAAGATACTGATGCCTAAATTCCATTCCAGAGATTTTGTTATATTTGTTCTGGGGTTTGACTTGGGCA 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 TTGAAGGTTTAAATGGTCACTAGGTGATTACATTATGTAGCTAAGGCAGAAAAACCTTTACTCTAGACAGATTC 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 TCTAGATCTATACTGTATTAATGCAGTAGCCATTGGTCACATGTGGCTATTTACATTTAAATTCATTACATTTA 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 GGTGAAATTAAATTCAGTTTCTTAGTCAAACTAGCTACACTTAAAGTGCTTACTTAGTAGTTACCTGTGGCTAA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 AGGCAACTGTGTTGGACAGCACCAATGCAGAACATTTTCATTATTGTAGAAAGTTCTGTTGGACAGTACTGCTC 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 TAGATTGAAACCAGTAATAGTGGTTTTATGGGGAAGAAGATTAGGACAGGGATGAAAAGGTGACTTGCTTTTCA 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 TTATATAATCTTCTGAACTTTTAAATTTTTGTATAATACTAATAAACTACCTATTCAAAAAAATCATTATTTAA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 AAAAATTAAAGAGAGGCTAGGTGTAGTGGCTTACGCCTGTAATCCCAACACTTTGGGAAGCCTAGGCAAGAGGA 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TTGCTTGAGGCCAGGAGTTCGAGGCTTGGGCAACATAACAAGACCTCATATCTTAGGAAAAAAAAAAATGGCTA 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 GGCATAGTGGCACACACCTGTAGTCCTAGCTACTTGGGAAGCTGAGGTGGGAGGATCACATGAGCCCAGGAGTT 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 CGAGATTGCAGTGAACTGTGATTGCACCACTGTACTCCAGTCTGGGTGACAGAGAGAGACCCTGTCTAAACAAA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 AAAGAGAGAGAGAGAGAGAGAGAGGAGGCAGAGTGAGATAACTGAATAGAAGCCTCCACTGATTGTCCTCCCTG 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CAGTAGCACCAAATTTGACAACTGTCTACACAGAAAAGTACCTTCATGAGAGCCAAAAATCAGCTTTAAGGAAG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CCTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTCTCTCCCC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 AAATATGCCTCCAGATTCACACATAAACCACAATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCTC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 AAGGACAGAGTCAGTGATTTCCATAAATTGAAGCAAAATGATGAAGAACGAGAGCTTCAAATGGATCCTGCAGA 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CTATGGAAAGCAACATTTCAATGATGTCCTTTAAGTCCTAAAGGAATGCTTCAGAAAACCTAAAGTGCTGTAAA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 ATGAAATCATTCTACTTTGTCCTTTCTGACTTTTGTTGTAAAGACGAATTGTATCAGTTGTAAAGATACATTGA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GATAGAATTAAGGAAAAACTTTAATGAAGGAATGTACCCATGTACATATGTGAACTTTTTCATATTGTATTATC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 AAGGTATAGACTTTTTTGGTTATGATACAGTTAAGCCAAAAACAGCTAATCTTTGCATCTAAAGCAAACTAATG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TATATTTCACATTTTATTGAGCCGACTTATTTCCACAAATAGATAAACAGGACAAAATAGTTGTACAGGTTATA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGTGGCATAGCATAACCACAGTAAGAACAGAACAGATATTCAGCAGAAAACTTTTTATACTCTAATTCTTTTTT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TTTTTTTTTTTGAGACAGAGTTTTAGTCTTGTTTCCCAGGCTGGAGTGCAATGGCACAATCTTGGCTCACTGCA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 ACCTCCGCCTCCTGGGTTCAGGCAATTTTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCCACCAC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CATGCCCAGCTAATTTTTGTATTTTTAATAGAGAGCTAATAATTGTATATTTAATAAAGACGGGTTTCACCATG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCTCCTGCATTGGCCTCCCAAAGTGCTGGAATTCCA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GGCATGAGCCACTGCGCCCAGTCTACACACTAATTCTTGTTAGCCCAACAGCTGTTCTGTTCTATCTACCCCTC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ATTTCACGCTCAAGGAGTCATACCTAGAATAGTTACACACAAGAGGGAAACTGGAAGCCAAACACTGTACAGTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTGTGTAGAAAGTCACCTCCCTACTCCTTTTATTTTACATGAGTGCTGATGTGTTTTGGCAGATGAGCTTTCAG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CTGAGGCCTGATGGAAATTGAGATAACCTGCAAAGACATAACAGTATTTATGAGTTATATCTTAGTTCTTGAAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TTGTGGAATGCATGATTGACAATATATTTTTAATTTTTATTTTTTCAAGTAATACCAGTACTGTTTAACTATAG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CCAGAACTGGCTAAAATTTTTATATTTTCAGAGTTGAAGTTGGTGAAGACATTCATGATTTAAACACCAGATCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TGAAAGGGGTTAAATCTACTTTGAAATGAATCTGCAATCAGTATTTCAAAGCTTTTCTGGTAATTTTAGTGATC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TTATTTGATTAGACTTTTTCAGAAGTACTAAATAAGGAATTTTAACAGGTTTTTATTAATGCACAGATAAATAG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 AAGTACAGTGAGGTCTATAGCCATTTTATTAAAATAGCTTAAAAGTTTGTAAAAAAATGAATCTTTGTAATTAC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTAATATGTTAGTTAAGAACCCGTCAAGCTTATATTTGCTAGACTTACAAATTATTTTAAATGCATTTATCTTT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTTGACACTATTCAGTGGAATGTGTAAGCTAGCTAATTCTTGTTTTCTGATTTAAAGCACTTTTAAATCTTATC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CTGCCCCCTAAAAACAAAAGGTTTTGATCACAAGGGGAAATTTAAGATTGTTAACCCTGTTTTTCAGAAGGGCT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 ACTGTTAATTGCACATAAACATGAAATGTGTTTTCCCCTGTGTACTAACACATTCTAGGCAAAATTCAAACTTA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TAGTGGTAAAGAAACAGGTTGTTCACTTGCTGAGGTGCAAAAATTCTTAAGACTTCTGTTTGAAATTGCTCAAT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GACTAGGAAAAGATGTAGTAGTTTACTAAAATTGTTTTTCTACCATATCAAATTAAACAATTCATGCCTTTATA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GGGTCAGGCCTACAATGAATAGGTATGGTGGTTTCACAGAATTTTAAAATAGAGTTAAAGGGAAGTGATGTACA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TTTCGGGGGCATTAGGGTAGGGAGATGAATCAAAAAATACCCCTAGTAATGCTTTATATTTTAATACTGCAAAA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 GCTTTACAAATGGAAACCATGCAATTACCTGCCTTAGTTCTTTTGTCATAAAAACAATCACTTGGTTGGTTGTA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TTGTAGCTATTACTTATACAGCAACATTTCTTCAATTAGCAGTCTAGACATTTTATAAACAGAAATCTTGGACC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AATTGATAATATTTCTGACTGTATTAATATTTTAGTGCTATAAAATACTATGTGAATCTCTTAAAAATCTGACA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TTTTACAGTCTGTATTAGACATACTGTTTTTATAATGTTTTACTTCTGCCTTAAGATTTAGGTTTTTTAAATGT 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 ATTTTTGCCCTGAATTAAGTGTTAATTTGATGGAAACTCTGCTTTTAAAATCATCATTTACTGGGTTCTAATAA 5180
Query 73 ------------------ 72
Sbjct 5181 ATTAAAAATTAAACTTGT 5198
