Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_158677.2
- Aligned Length:
- 5439
- Identities:
- 64
- Gaps:
- 5367
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCCGGCCGACCTCGCGGGCTTGGGCCTGGGCGGGCACCGACGGAGCGGCCCTGGCTGCAGCCTCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGCGAAGACAGGCTGAGATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGAACTGCATTCCCAAGGGGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATGGGACGCCCTGCGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTGGCAAGAGGGATGTCTGTGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATGACCTCAGCCGAGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCGAGGCGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGGGCCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGCGGGGTGCTGAGGGGGACCTGGCCCCTGAGCGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCATGCCCGGGGCCCCACCTCGGAGCCCCTGGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGGTGTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATGAGTACCACCTGCCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCGCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGGCAGGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACTGCATCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGGAAGCCCCCTGCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGCCCTGGGGAGAGTGTTCTGTCAGTTGTGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTGGCGTCCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTCCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGCCATTGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCAGCCCTGTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTTGGGCCCTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGGCCCCGCTCCCTCTCTGCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCAGCCCCCATACCAGCAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAGTCCTCACGGGTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCCCGATGGCCACACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCCTGGGGCCCCCTGTCAGCAGAGCAGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TACGGGTGCTGCCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCTACAGTCCACAACACCCACCAGCCCCAGGCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGCAGAATGAGCCCAGTGAGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGCAGCCGGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCGTGCGGTGCCTGCTGCCCAGTGCCCATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCTTGCGCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCCGTCGTCCCCAGCCTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTTCTGGTGGTCTCTGGCGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGACCAACAGCCTGGGCCAGGGGAGGCCCCCCACACCCAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCTCCTCCTACAGGAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTTCACGTGACAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTCCCTCCACCTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGCTCAGGACTTTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCCAAGCGGGGGCTGCTGGGCCCCTGGGGGCCATCCCCTCTTCACACCCACAGCCTGCAAACAGGCTGCGTTTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GACCAGAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCCCAGCACCCACCGCCCAGCCCAGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGGCAGT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGATGGACTCTTGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GCTGCTGTTTTCAAGAAGAGCAATCTGTTTGGATAAGAAAAACCTTTACTTTACAGCTTCCCTTTATAATTTGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TACACAGGAATAGTTAAATGCATTTGTTTGTTTGTTTTTTGAGACAGAGTTTCACTCTTGTTGCCCAGGCTGGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGGCAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGA 3922
Query 1 ------------------------------------------------------------ATGGGGTTTCTCCA 14
||||||||||.|||
Sbjct 3923 GTAGCTAGGATTACAGATGCCTATCACCATGCCTGGGTAATTTTTGTATTTTTAGTTGAGATGGGGTTTCACCA 3996
Query 15 TGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------- 72
|||.||.|||||||||||.|||||.||||||||||.|||||.||||.|||||||||||
Sbjct 3997 TGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCAGATGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CAGGCATGAGCCACCACGCCCAGCCATCAATGCATTTTTTTTATTTTTTTTTTGAGACAGAGTTTCGCACTTCT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TGCCCAGGCTGGAGTACAATGGTGCGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGCTTCTCCA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ACGGGGTTTCTCCATGTTGGTCAGACTGGTCTTGAACTCCCGACCTCAGGTAATCCGCCCGCCTCGGCCTCCCA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAATGCTGGGATTAGAGGTGTGAGCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCTAGCTGTCAGGGTTCC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 ACTTAATTTAAAGCTGGGCAGGGAGATGTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCATG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTCTCACCC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TTCTAGGCAGTGCATCAGTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 ATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATCTGAGCATGAAAGA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 ACTGGAAACGCTCCTTACGTCGAGATGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 CGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTCTTCCTT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAAAGACAAATCAGACTGTCAGTCATTAAAAACAGCATTAG 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 CAGGATGAGGATAGCAATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGGCTTCAGAAATGGTTTGAG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TTGGAAGACAACATTCTTCATCTCTCAGGACTTCTAATTCCTTGATGCTAAAAGAAGAGGCATGGATTCTATGA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GCTTCCAAGTCCCTTTCCACTTTAACCTTCTACAAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTG 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 GACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 AAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCATTCAACAAAGGAAATGTGGGCT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GGGGCAGAGGTCTTTTTTCATTTAATACTGGAAAAATATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTTG 5402
Query 73 ------------------------------------- 72
Sbjct 5403 CTATAGAAATTGGAAAATAAAGGCCACTTTTTTGAAA 5439
