Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- NR_158678.2
- Aligned Length:
- 5514
- Identities:
- 64
- Gaps:
- 5442
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCCGGCCGACCTCGCGGGCTTGGGCCTGGGCGGGCACCGACGGAGCGGCCCTGGCTGCAGCCTCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGCGAAGACAGGCTGAGATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGAACTGCATTCCCAAGGGGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATGGGACGCCCTGCGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTGGCAAGAGGGATGTCTGTGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATGACCTCAGCCGAGGCTACAACCAGATCCTCATAGTTCCCATGGGTGCCACCAGCATCCTCATCGACGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTGCCAGCAGGAACTTCCTGGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCGGCCCGGGCCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGCGGGGTGCTGAGGGGGACCTGGCCCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGCGACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGCACTATGAGTACCACCTGCCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTGCAGCGCGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACCACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCGCTGGAAGGCAGGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCATCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGGAAGCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCTGCCATTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGCCCTGGGGAGAGTGTTCTGTCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGTGGCGTTGGCGTCCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGCATGTTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCCCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGCCAGGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGACCACAGGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGGCCCCGCTCCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTCTGCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAGTCCTCAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGTGCTGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCCTGGGGCCCCCTGTCAGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGCAGGTACGGGTGCTGCCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAAGTCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGGTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCTACAGTCCACAACACCCACCAGCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCCGGTCCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGGATTAGCTTGGCAGGTGTGGAGCCCTCGTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTGTGTGTGACGGCCCCCCGACCTCCTCTGACAGGTGTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGACAGCCCCCCGACCTCCTCTGACAGGTTCACGTGACAGCTCCCTCCACCTCCGCTGACAGGCACAGGCTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAGCCGCTTCCCTCAGCCCAGGGACCCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGGCCCCTGGGGGCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCCCTCTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGATGCCAGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGGGAGCTGACAATCTCAGGACTGCCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCCAGGCTATTGTGTGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGTAGCAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACCAGTCCCCAGATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TACCAGGGGAGCCAGGCAGTCAGCCGCAGCACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCCCAGCCCAG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGGCAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGATGGACTCTTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGCTGCTGTTTTCAAGAAGAGCAATCTGTTTGGATAAGAAAAACCTTTACTTTACAGCTTCCCTTTATAATTTG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTACACAGGAATAGTTAAATGCATTTGTTTGTTTGTTTTTTGAGACAGAGTTTCACTCTTGTTGCCCAGGCTGG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGGGCAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG 3996
Query 1 -------------------------------------------------------------ATGGGGTTTCTCC 13
||||||||||.||
Sbjct 3997 AGTAGCTAGGATTACAGATGCCTATCACCATGCCTGGGTAATTTTTGTATTTTTAGTTGAGATGGGGTTTCACC 4070
Query 14 ATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------- 72
||||.||.|||||||||||.|||||.||||||||||.|||||.||||.|||||||||||
Sbjct 4071 ATGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCAGATGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ACAGGCATGAGCCACCACGCCCAGCCATCAATGCATTTTTTTTATTTTTTTTTTGAGACAGAGTTTCGCACTTC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGCTTCTCC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 AGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GACGGGGTTTCTCCATGTTGGTCAGACTGGTCTTGAACTCCCGACCTCAGGTAATCCGCCCGCCTCGGCCTCCC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 AAAATGCTGGGATTAGAGGTGTGAGCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCTAGCTGTCAGGGTTC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CACTTAATTTAAAGCTGGGCAGGGAGATGTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCAT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTCTCACC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CTTCTAGGCAGTGCATCAGTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATCTGAGCATGAAAG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 AACTGGAAACGCTCCTTACGTCGAGATGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 ACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTCTTCCT 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TAAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAAAGACAAATCAGACTGTCAGTCATTAAAAACAGCATTA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 GCAGGATGAGGATAGCAATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGGCTTCAGAAATGGTTTGA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCTAATTCCTTGATGCTAAAAGAAGAGGCATGGATTCTATG 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 AGCTTCCAAGTCCCTTTCCACTTTAACCTTCTACAAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 GGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 AAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCATTCAACAAAGGAAATGTGGGC 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TGGGGCAGAGGTCTTTTTTCATTTAATACTGGAAAAATATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT 5476
Query 73 -------------------------------------- 72
Sbjct 5477 GCTATAGAAATTGGAAAATAAAGGCCACTTTTTTGAAA 5514
