Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
NR_163416.1
Aligned Length:
3208
Identities:
63
Gaps:
3136

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTCCGGGCAGCAGGGAAGATCTGAGTTCATGTAGCTGGTGTTGGCTTAGGGTCTGGGAGGAAGGCTTTTGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGATGTAAATAAGAACAAAATCTGCAGCCACCTGGGAAGCCTGGCCTCAGTGTGGAAGAGAAGGCAGCAGGATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTACAGAACCTTGTGAAGCCAACGCGGGCAGCCGCCAGGAGCTGCAGACCGAGAGGATCTCGTCCTTTCTTGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCCCAGGGAGACCAGGCCTTTCATTCTGGGCTCGAGACCAACAATTCGAATTCCGAACTCCCCCTGCGTGTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GACTCAAGGTTGCCCAGGGCTCACCTCTGATGGGTGGGCAGGTGAGCGCTTCCAACAGCTTCTCGAGGCTGCAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCAGAAATGCCAACGAGGACTGGATGTCGGCACTGTGTCCCCGGCTCTGGGATGTGCCCCTCCACCACCTCTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATCCCAGGGAGCCACGACACGATGACGTACTGCCTGAACAAGAAGTCCCCCATTTCGCACGAGGAGTCCCGGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGCTGCAGCTGCTGAACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAAATGGTCCGTCACCCAGGCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGGACGTCACAGAGCAGCTGGATGCCGGGGTGCGGTACCTGGACCTGCGGATAGCCCACATGCTGGAGGGCTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGAGAAGAACCTGCACTTTGTCCATATGGTGTACACAACGGCGCTGGTGGAGGACACACTCACGGAAATCTCGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGTGGCTGGAGCGGCATCCACGCGAGGTGGTCATCCTGGCCTGCAGAAACTTCGAGGGGCTGAGCGAGGACCTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACGAGTACCTGGTCGCCTGTATCAAGAACATCTTCGGGGACATGCTGTGTCCTCGTGGGGAGGTGCCGACACT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCGGCAGCTGTGGTCCCGGGGCCAACAGGTCATCGTCTCCTATGAAGACGAGAGCTCCTTGCGCCGGCACCACG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCTGTGGCCAGGAGTCCCCTACTGGTGGGGAAACAGGGTGAAGACCGAGGCCCTCATCCGATACCTGGAGACC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATGAAGAGCTGCGGCCGCCCAGGAGGGTTGTTCGTGGCCGGCATCAACCTCACGGAGAACCTGCAGTACGTTCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCGCACCCGTCCGAGTCCCTGGAGAAGATGACGCTGCCCAACCTTCCGCGGCTGAGCGCGTGGGTCCGAGAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGTGCCCGGGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTTCATCGGCGCAGACGGCTTCGTCAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GACGTCATCGCGCTCAATCAGAAGCTGCTGTGGTGCTGACGGGACCCTTCTGAAGTTCGGGACGCGGCGGCTGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGTTTCACCCCCGAATTTCCAAGTATTGTGACTTTGTTTGGGCCAAATGTTGGTGATCATAGGACCGATGATAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TACGTTTTCATTTTCTTTAAAATAGAGATGGGGTGGCTGGGCGTGGTGACTTCGCCTGTCTTCCCAGCACTTTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGAGGCCGAGGTGGGTGGATCATGAGGTCAGGAGCTTGAGAGCAGCCTGACCAACATGGTGAAATCCCATCTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACTAAAAATACAAAACTTAGCTGGGTGTGTGGCAGGCGCCTGTAGTCCCAGTTACTCGGGAGGCTCAGGCAGGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAACTGCTTGAAGCCGGGAGATGGAGGTTGCATTGAGCTGACATCGTGCCACTGCACTCCAGTCTGAATGATAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCGAGACTCCATCTCAAAAGAAAAAAAAACAGCCGAGTTGCTGGGATCACAGGCGTGAGCCACCGCACCTGGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCAAGCCAGTATTTCCCTGGCCCTAAATCATTCCTGGCTGGGTCCCAGCCCAGTAGAGCCAGCCCCCCAGCCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAGTGCTACTGAAGTGTTCAAAAGTTGTCAATCCTCAGCCGTTCCCTAGTCCTGTTGCCCGGTTCTGCCGAAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCCCTTGAAGGCTGTGGCCTGGGCTGTTCCCTCATTCATTCCTGCCTCCCGAGCCAAACCCAGGTATCCGCTTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGCCCTGCGTGGTGTGGCAGCGTCTTCTCTCGGGAAGGGTCAGGAGTAATTTCTTCTTTCAGTGGCCTCTCTGT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCTAGTCCCGGTCACCTCCGTGAATTAAAGTCCTACAGGTACAAGGGAGACCCCCCCCCCACGGAAGGCGCCCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAGTCCGTGTGGGAGACTCGCACACCGGTTTTCTGCACAGGTTTCTTTCTGCCTCTGAAGCGTGAACGGTCCTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTTTCAGACGCAGATCCTGCAAATACTTTTTTTTGTTTTTTTGAGATGGATTTTCCCTCTTGTTGTTCAGGCTG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CCGAGGAGCTGAGATTACAGGCGCGTGCCACCGTGCCTGGTTAATTTTGTATTTGTATTTTTATTTATGTTTTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AGACGGAGTTTCGCTCTCGTTGCCGAGGCTGGAGTGTAGTAGTGTGATCCTGGCTCACTGCAACCTCCACCTCC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CGGGTTCCAGCAAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCGCCACCACGCCCGGAT  2590

Query    1  ----------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTG  52
                                  |.||||||||.||||||.||.|||||||||||.||.||||||||||||||||
Sbjct 2591  AATTTTTGTGTGTTTAGCAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTGACCTCAGGTG  2664

Query   53  ATCCGCCCACCTCAGCCTCC------------------------------------------------------  72
            ||||.|||.||||.||||||                                                      
Sbjct 2665  ATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACCGCGCCCGGCCTATACCTCATTTT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  CTACATGTCGCTTGTTGGAGCTGCTGGTTCAAGTTCCCAGCCAGCCAATGGATGCCAGCACCATTTTTACTCCC  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  CTTTCCCAAGCAAATCGTGCATTTTTGTCTAACGAGAGACATCAGTTTCTCAGGATGATCCTCAAGAACGTTAT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  GGAGTCCATGTTGCAATAGGTTCTCTTTGGGACCTAATGACTCATTTTCCAAAAATCCGCTTCTACTTTTGGTA  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  CCCGGTTGCTACGGTGAAATGAAGGTGCCCCGCATCCAGAAAGACGCACTCCTGGACCACAACCGGCGGCTACC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TCAGCCCCACGGCTCTGCAGGATCAGGGCTCGGGCAGGCCCCGCGGAGATGAAGAATTTGCAGGGAGCCTCCCT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  GACTTCCGTCGGCTGTGAATCCTTGTCTGTCAGGGGCGTATCCACAAAATCACCGAATTCATACAGATCGTTTA  3182

Query   73  --------------------------  72
                                      
Sbjct 3183  AATAAATGAACATCATTAAAGTCAAA  3208

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