Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001737162.2
Aligned Length:
3811
Identities:
65
Gaps:
3739

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGAGGGTCGTCTTCCAGGAGCTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAGCTGCTAACTGGCCTCAAATGATGCATGTGAGGTCAGGATTCATTGAGTAGAATGCCCCCACCAAGTGCCTC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCTCTTTAATTAGAGGTCATCATGGAAATGGTCGGGATATTTACGTGGTGCCTGGCTTGAGTAAAAATCTGAAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCAGATGCTTCAGGATTAAGACCCCATGCTCTGGCCTTGGCCCCACAGCCCAGCTCCATGACCTTCTCCAGCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GGAGCGGCTGGAGCCCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GCAGGAACAACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AAAGGAAACAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACAGAAAAATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCTCTTAGAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTTGAGATGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGGTGCAATCTCGGCTCACTGCAACCTCTGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGACACCACGCCCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GTTGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCAT  2960

Query    1  ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC  40
                                              |.|||||||||||||||.|||||||||||.||.|||||||
Sbjct 2961  CACACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCC  3034

Query   41  TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------  72
            ..|||||||||||||||||||||||.||||||                                          
Sbjct 3035  CAACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCG  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  GTTATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCT  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TTGGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGA  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  TGACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTAC  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  GCACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAAC  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  AAGACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTT  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  AACCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  AGCTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGA  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  TGGTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAG  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  GCACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTC  3774

Query   73  -------------------------------------  72
                                                 
Sbjct 3775  ATTTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAA  3811

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