Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001737164.2
- Aligned Length:
- 4844
- Identities:
- 65
- Gaps:
- 4772
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAATTCCGAGGGTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCGCCCGGTGCGGGCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCCCGGAGCCGCACTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAGCGGATGTCGGGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGTGTGCCCGCTGTGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCCTGCGTGGCCGCGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACACGTGCGGACAGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATCGTGGCCCTGGGTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTCCACCGACAAGAAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGGACCTGGAATCGGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACGGCCACGCGGGAGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGACGCTATCCACGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGCAGAGCCAATACGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTGCAGGTCCACCTGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGTGAGTCTCCTCTGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGCAGATGCCCCCTCCCCACCAGGAGCCCACCCTGCAGACCAAAGCCACCAACTCAGGGGTGGGCAGCCTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACCTGGAGCCTGGACCAGGGATCTCGGGGCTGACCCCCTCCCAACTCCATCATCTGCAAACCTGTTAGGGTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTTACAAGGACAGTGAAGCCAGGAAGGGGGCATGAGCCTACAGTCCCCCGTGGGGCGGAGTGACCACTGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCAGCCGCCCCCTCTCCTGTGGATTTGGGGATGGGATGGGGGTTTGTCCGGGTGAGTCCCAGAAGAGGGCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGCTGCTAAGGGACACCAAGTCAAGTGCCAAAGACAGACGTGCTCCGCCTCCATCTCCCCTCTTCCTGCCCCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTGCCACACCTCCACCGGCCTGAGGCCCTCCTCACTGCCACAGGAGCTGATGGAGAGGCTGCAGGGCATCGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCAGTGACCACCGAGCTGAATTCGCGCGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTGCAAGTGGTGCTAACACGCTGGCAGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGTAGGAAAGATGTCGGGGTCACCCGTCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGGAGGGCGAGAACACGCCCTTCGCAGAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATGCAGAGCCTAAAGGACCAGGTACAGGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGATCATGGGAGACGTCCTGCACAAGTCCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCATGAGGGTCGTCTTCCAGGAGATTTGGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCTAACTGGCCTCAAATGATGCATGTGAGGTCAGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTAATTAGAGGTCATCATGGAAATGGTCGGGATATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGCTTCAGGATTAAGACCCCATGCTCTGGCCTTGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAGAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTCTTTGTTTGTTTGAGACAGTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCGCTCTGCCGCCCAGGCTGGAGTGCAATGGCGCCATCTCAGCTCTCACTGCAGCCTCCACCTCCCAGGTTCAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGGTGCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTA 3478
Query 1 ----------------------------------------------------------ATGGGGTTTCTCCATG 16
|.||||||||||||||
Sbjct 3479 GCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATG 3552
Query 17 TCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------ 72
|.|||||||||||.||.|||||||..|||||||||||||||||||||||.||||||
Sbjct 3553 TTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 ATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCAT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 AGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 CCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGTGACGTA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAGTCACATTTAAGCAAATATTCAGCTTGATTCAGTG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 ATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAACACATAACACATCACTCACATTGACGTCC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 ACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGACAATCA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 CACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAA 4810
Query 73 ---------------------------------- 72
Sbjct 4811 TCCAATTTAGAATATTTAAATAAACATTTATGTA 4844
