Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001737207.1
- Aligned Length:
- 3907
- Identities:
- 65
- Gaps:
- 3835
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGGCGGGGCGGCAGAGCTCGGCGGCTGGGACTGGAGGACAGCGGTGGCGGAGGCGACTAGCGGCGGCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGCCGAGAGGCCGTGCGGGACGCGGGCGCCAGGACCGGCCGAACGCAGAGAAGGTAGAAGATAGCACCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGAAAATAAGTCTTCTGAGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCTTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCCATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATAGAGGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACACCTCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCAGTATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGGAACTCCGACCCACCTGGTGCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTTGTCTTGATGCTTTTCTCTTCCTCCTTGGAAAACAGCTGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAAATCAGGGGAGAAACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATGAGCCGAAGACCTGCTCTACCACTGCTCTGAAGAAGTATGTCCTAGAGAATCACCCAGGAACCAATTCTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTATCAAATGCATTTGCTGAAAAAAACCCTGCAGAAATGCGAAAAGAATGGGTGGATGGAACAGATCTCTGGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGGTTCAGTGGCACCTTCCAGCTCTGTTTTCCCTATTATCCCAGCCCAGGAGTTCTGTTTCCGAAGAAAGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGATGATTCTAGAGATGAGGATGAAGATGAAGATGAGTCATCAGAAGAAGACTCTGAGGATGAAGAGCCGCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGGCTCCTCAAAGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCTGCAACCAGTGCAAGAAAGGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTTTCAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAAAAAGTAAATTTTATAGGAAAAAAGGGTATCATGATGAAATTCAAAATCTTATTTTCTAAGGTCAGTGTGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTTGTTTAGTTTTGATGCTTTTCAAATTACATTATTTTCCTCCCCTATGAACATTGTGGGGAGGGACTCTAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAAACCAGTTTAGGCATTTGCTAGCTTTAGGTGCTTTTATTGGTGCCTGCCCTTTTCCTTGTTCATTTTAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGCAATAATCCTGGACTTTCCTAAACTATGTAATGTATACTTGTCCTTTTTCTCTGCCTCCCCCAACCCCCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTGTTTTTATGGTCAGCTTTGCCTTTTTTTTTTCTTCCAATTTTATCTAAACAGTTGCAGAGATTTTTATATTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTAGAAAGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAGTAAAATGGAGGCACAATATAGCACTGACTGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATAATTAATCTTATTTATAAAAGCCACTCCACTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCTTTTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAAGATATATGACTCCTTTGGGCTACATTTCATATTGATCAATTTCTAGGTATTTTTCACTGGCCCAAAGTAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCATTCCCTTAACAGCAAGCACAAGTTCTCTATATCACTTGTTTTTTGTTGTTGTTGTTGTTGTCGTCGTTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCACCTCCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTGTGTACCACCACGCCTGGCAAT 2664
Query 1 ---------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGA 53
||||||||||.||.|||.||||||||||||||.||||||||||||||||||||
Sbjct 2665 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCGTGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGA 2738
Query 54 TCCGCCCACCTCAGCCTCC------------------------------------------------------- 72
||||||..||||.||||||
Sbjct 2739 TCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTGCCTGGCCTATCCCACTTGGTT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TTTGACTGAAGGGGAAGTGTAGAAATATATTGATTTGTGATTTCTGGTGTCACCTGTGTTACCAAAAATCAAAA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 CAAATCTTTTTTATTTTTTATTATTATTATTATTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGTGTGGAGTGC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGTGGTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAGGTTCAAGCGATTCTCCCACCTCAGCCTCCTGAGT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TGGGTCCTACAGGCGCACACGACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGTTGGGGTTTCACCATGT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTACAGAT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 GTGAGCTACCACTCACGGCCCAAATCTTCTTGATCATATGTTTAAATATATTTTTTAATATTTGGAGCATGAGT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TGTCACTTCTTGTTTGCCTTTTTTATAAGGAAATGTTGGAGAGTTACATCATTGCTAATGTAGAAATGTTAAGT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GGAAAAATATACAGTTTGGTAAAATAAACTAGATTCTACATTTATTTGTGGGTTTTTTTCCCCTCCTTTCTTTC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CACAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTGAGATATTAAAAAAAAAAAGAAAAGGAAAAAAGTAA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 ATGAAGCCCAACTACCTAACCCTTTCTTATTTGTATTTGTTTTAGTATTGTGAAGTTGTGTTAAATAGTACTAG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CTAGAAATACAAATTTCTGGTTATCATTTCTCTTCCCTGTGGCACTTGACATTTTAATTGTCTTAAAGTTTTTG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AAGTACATCTTCTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCTTATTCATTCCACTTTTGTCT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAATGGACTTGAGAAGATTGGCTTGAATTAGATCATAA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAAATCTTC 3848
Query 73 ----------------------------------------------------------- 72
Sbjct 3849 CTTTTTTAATGTACATATATTTTGAAAAATATGAATAAACATGAAATTTTAAAAGCTGC 3907
