Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001737364.2
- Aligned Length:
- 4366
- Identities:
- 65
- Gaps:
- 4294
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGCTGGTTTGCCCTCCCCCTGGTGTTGGCCCGGCTGACTCGGGGTAGGGGAGGTCGGGGAGGGGGCGATAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGCGCAGGGGGCGGAGTGAGGCGCAGTCGTTCGCCCAGGCTTTGGCCCGGCTTCCGGAGGAAGGTGGGAGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGCAGGAACTGAAACCTTTTTCCATTTGGTCTCGTGGCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGCAGAGATTGCTCCAGCAGCTCCACACAAAATGATGTGCTCACGGGTGCCCTCTGAACAGTCTTCTGGTACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGGATGACTCCTTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGCTGTCAGAGGGAGAAGAAGATGATGGTGATGTAAATTACACAGAGGAAGAGATTGATGCACTGTTGAAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGGAGAAAGAGGGAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAATTCTACTTGATACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTGAGACTCCTGACCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTAAACAGACGCTCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACTAGAAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGCTCTGCTTGATAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAGAAGATGGTCTTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGGAATGGGCCCCAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGAGAACCCTACGTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATGGTGGTTCACACAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAACAGGATGTTCTTAACAAGGATTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGACCAGGACTAATGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAGGAGTGTCATTGCTCATATAGAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCAGAGGACACTAACCAAGCCAAAAAATACTGGAAACAGCTTTGATAAAATGTTGATAAATGAAGGTATCTCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGGAGCTTTGTGCCTTGATGGATCAAGTTCATCATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACGCGAAACTACGCCCGCCGACAGAAACATCTGCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAAGCCACCATCGGTTCCAGCGTCTCCCAGACTTCTCGTACAGTTAATTTGTGTCATCCCATCAGCAATGAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTTTTGCTGTTTTGTGCTTTGCCGATTTTGGATTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATTTTTCACAAAATTTTTATTTAAAAAACTCGTCACCTTTTGGAAATGCCCATTGCCGACTTGAATTTTTTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATGAAGTCCCTCCTGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTTTTTTTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTTTTTAATTTAAATTGAAGGTAGCTGCCTCCTGAAAGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAAAGAAATCATTGTTCAATCTTCCATAAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGAGATTCTTTACCAGGCTGTGAGCCAGTGTTAGATAACTTGTGAATGGATATAAGTTACTTTTAACAACCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTTACTTTTTTATTTGAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGGCAATCCAGGACATTATAAGTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GATGGAGCAGGAGAAGAATCCTATTGAAAGGACAAATTAAAATAGTAAATCCTCTCCTCTCCCTTCTGTAGGTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTAGCTGCCTTGATTTTTTTTTGTGGGTGGGGGGGATTTTTTCATTCCTTATTGAACTTATTTTGCACAATAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTTTACAAATCTTATACATCTTACTTTGACAGAAGACTTATAATACCTTGTGGTCTTGAGACTGGTTGTCTCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTGCCTTTCTTCAAGGATTTTCCTTTTTCTTTTTACCCCCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTATTCTTGTAACCTGTTAGACGTGGATATACCTCTTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGTGGTGTCAGTTGATATTTAGTTTCATTTGCTGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACCCCAAATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCACTCTTTTTTCTCCAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATTAGTTAACAAGAGGTGTCTTTAGGCCCTGGATGTTACCATCTCATTTGGTCAAGCCCCTGATACCTAGTTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACATGGATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGTTTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTATTCTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTGGTTATTCTCTCTTTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTTTGAGACGGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCGTATCTCCACTCACCACAACCTCCG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCTCCTGGGTTCAAGGGATTCTCCTGTCTTAGCCTCCTGAGTAGCTGTGATTACAGGCATGCGCCACCATGCCT 2960
Query 1 --------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCA 48
|..||.|||||||||||.||||||||||||||.|||||||||||||||
Sbjct 2961 GGCTAATTTCATATTTTTTAGTAGAGACAGGATTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCA 3034
Query 49 GGTGATCCGCCCACCTCAGCCTCC-------------------------------------------------- 72
|||||||.|||||||||.||||||
Sbjct 3035 GGTGATCTGCCCACCTCGGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCGGTTATTCT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CTCTTTACAGATAGCTATAGACATCATTTTAGGAAGTGTTGCAGTCTGGCATTTGTGCTATTGTTCATTCTCTG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGAAGGCTGTTCATAGTTGCTATAGCCTGTGTTTAGTTTTGTGATTTCATCAATCCCATCTTTCTGTGTGAGTA 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 ATGCATTCTAAACATCCTACCCCACTTTAGAAACGGACGTGGGGAACGCTTGGTCATTTAAGCCAACAATAAAT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TTAGGTGAATGTCCCTAAGTGTTTACTGTTTTTATCCAGTCAAGGATTTGCTTTTCCTTGAACATTTGTTTTAA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ATTCTGGGGCCAAAATGCAAAGGAGAAGTTCTATTCAAAGGCAGTAGTTGAAATCTATTATTTTAGTTAGCCTA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 CTTGGCATTTACTACATCGGTCACTTCTCCAGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACAT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CCACCTTTGGGACCATAGCATAGTTAAAATTAAATGTAGTTGGAATAGCTAGCATTGCAGCTACAGTAGGGAAC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TGTAGTCTAGTTCCCTACAGAAAACCCAAGGAGTGAAGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACTGCCTTTGCCAAATCAAATGAGTGA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CAGGTTAACTAGAAAATGTGACAATCACATTTCCTCTTAGCTCAAATAATTCTGTTTTTCCAAAGCTTTAGCAG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CTTAATTAAATCTGTTGGACTGGGGGAGGAGAGAGCTGTTCTCTAGTGGTTAACATGGTATTCTTTAAGAAGAA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AAAACAAAGCCAAAGAAAACTCATTATCTGGCATGTTCGCCTTAAAGATGGTACTGGGTAGAATCTGGAGTTTT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CATCTCTTTTCAAAGCTGCATATCTCTTATATTTGGTATTGGCCTCTAAGTCTAATATTGCAGTTGGAATTCTT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GCTGTATTATTTTTTAAGCAAGTGTTAGGTGCATTTAACTGCTTTCTTCATCCATGACGACATTCCCACCATGG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGGTCTTGACAAAGCAGAGTAAAAATATGCTGTTTACATTGTTTACTTACAAGTAAGGAGCCTGAAATAACCTG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TAGTTTCGAATGCAGGCCCTGATTTACTGGCGTTGTCAGTTTCAATTATGAAACTGAAGTTTGGTGCCTCCTCT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTATCATGTTTTTTCCCTTGTAGCAGTTGTGTTTAATGTCATTAAAAAGAAATAAAAGTTCTTTGTCAGTGACA 4366
