Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001737469.1
Aligned Length:
3921
Identities:
63
Gaps:
3849

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGGGTGTGTGTTTCGCCTGCGCAGTGGTCCTGGCCACCGGCTCGCGGCGCGTGGAGGCTGCTCCCAGCCGCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGAGTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTGCGAGCATGTCGTGGCTCTTCGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGCGCAGCCCGGGGCCGAGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACTTCGACCCCACCGGCCTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACGCCAAGGAGGCCCTGAATCTGGCGCAGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGCTGGAGTGCAATGGCGCAATCTCGGCTCACT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCAACCTCCGCCTCCCGGGTTCAAGCGATTCATCTGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCACGCGC  518

Query    1  ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC  40
                                              |.|||||||||||||||.||||||||||||||..||||||
Sbjct  519  CACCACGCCTGGCTAATGTTGTATTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCTAACTCC  592

Query   41  TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------  72
            .|||||||||||||||.|||.||||.|||||.                                          
Sbjct  593  CGACCTCAGGTGATCCACCCGCCTCGGCCTCTCAAACTGCTGGGATTACAGGCACGCGCCACCACGCCTGGCCT  666

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  667  ATTTTATTTTATTTTGAGACAGAGTGTCACTCTGTCCCCCAGTCTGGCGTGCAATGGTTTGATCTCGGCTCACT  740

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  741  GCAACCTCCACCTCCCGGGTTCAACCTCCTGCCTCAGCCTTCCGAGCAGCTGGGACTACAGGAGCCTGCCACCA  814

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  815  CATCTGGCGAATTTTTGTATTTTTAGTAGAGAAGGGGGTTCAGCATGTTGTCCAGGTTGGTCTTGAACTCCTGA  888

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  889  CCTCAGGTGATCCAGCCACTTTGGCCTCACAAAGTGCTGGGATTATAGGCAAGAGCGATGGCGCCCGGCCCACT  962

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  963  CAGCAGGATTCCTAGAATGGGCACGAGCTCTGCCCTCATCACAGTCCAAAAGTGAGCACCTGCCTGGAGCTGCC  1036

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1037  CAGAAACAGCCTTGTGGGGTGGGGTTGGTGTCTGACCTCCCTCCCCGGGGGCCTTCGCAGGCTTCTCTGCTGGT  1110

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1111  GCTTCTGTGCCTGTGGGTCTGGATTCCTCCAGGGCCTGATCCTGGGTGCAGATGCAGCTGGAAGCCCTGAACCT  1184

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1185  GCTGCACACACTAGTCTGGGCACGGAGTCTCTGCCGTGCCGGAGCTGTGCAGACACAGGAGCGGCTGTCAGGCA  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  GTGCCAGCCCTGAGCAAGTGCCAGCTGGTGAGTGCTGTGCTCTGCAGGAGTATGAGGCCGCCGTGGAGCAGCTC  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  AAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGC  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  CAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATG  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  AGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAG  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  ATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGA  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  GAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCA  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  GGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTG  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  GCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGA  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  GGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCA  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  TCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAA  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  GCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCT  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  GTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCC  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  AATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGA  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  GATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAACCCCAGTC  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  ACGTGTCACACGGAGGATCAAGTCCTGCTGGTCGGCCGTGGCTGACTCTTCAGGCACGTTGGGCTCCTGGGTCA  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  GCTGCTGCCGTTCGACGCTCCCTGGAGCCCTGACTCAGGTCCTTCCCAGAGAGGCAAGGCTGGGGCCCTGCTGA  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  GCCTCTGCTGAACCCGGGCCCCCGAGGTCCTGCTTCTGGCTCGCATGGCCATAATCTTGACAGGGACTCTGGGT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CCCGCATCCCTGCTCCCAGCACAGCGGGGCTCAGGTAGCAGGAGGGAGTGGTGTTCCCGGCACTGCCTATCAGG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  CTGGGCGAGGGTCAGCGGGGAAGTACCACACAGGGCAAGAACAGAGGCCCGAGAAGCCGGGCGGGGGGCAGCTG  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  GGCGTGGTGGGGCAGGCAGGCGGGTGACCAGGGCTGTGGCTGCGTTCTCCCCATGTTTCCTGTGCTCACAAGCT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GCCGCTTTAGATTCTCCCAAAAAGTCTCCCCGAGGGGGCTGAGGAGCCCCCGTTGCCCTCGGGGCATCTCAGCT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  GGCAGCCCCAGCGTTTCCTTCCCCATCCCTGTCCTACAGATTCATGCTGGTCCTGGCCAGCAATCTGCCTGAGC  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAG  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  CGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGC  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  CCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  AGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  TGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGT  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  CGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCT  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  GCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCC  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  AGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTGTAGGCACTGGCTAGGGAGGG  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  GCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATTTTCCGTCTGGCTCACAGGGGGAGGGTGAG  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  GCTTTGTACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGCTGGCTGAGCCCCTGGGGCAGAAGGAGTGG  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  GGCAGGCGGGGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTGAGGGGGGGCCTGCCAGGACTAGACAGAAG  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  TGGGGCGGCCTGAACCCTGCTTCCAGCCATGGCCAGGGGCCACGGAACCCGGCAGGGGTGTCTGAGGCCGCCCT  3848

Query   73  -------------------------------------------------------------------------  72
                                                                                     
Sbjct 3849  GTCAGCTGGCCGGTCCAAGCCTGTGGCTGGAGCTGGTGTGTGTTTATCTAATAAAGTCCCACAGGTGCCTCAC  3921

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