Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001737469.1
- Aligned Length:
- 3921
- Identities:
- 63
- Gaps:
- 3849
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGGGTGTGTGTTTCGCCTGCGCAGTGGTCCTGGCCACCGGCTCGCGGCGCGTGGAGGCTGCTCCCAGCCGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGAGTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTGCGAGCATGTCGTGGCTCTTCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGCGCAGCCCGGGGCCGAGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACTTCGACCCCACCGGCCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACGCCAAGGAGGCCCTGAATCTGGCGCAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGCTGGAGTGCAATGGCGCAATCTCGGCTCACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAACCTCCGCCTCCCGGGTTCAAGCGATTCATCTGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCACGCGC 518
Query 1 ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC 40
|.|||||||||||||||.||||||||||||||..||||||
Sbjct 519 CACCACGCCTGGCTAATGTTGTATTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCTAACTCC 592
Query 41 TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------ 72
.|||||||||||||||.|||.||||.|||||.
Sbjct 593 CGACCTCAGGTGATCCACCCGCCTCGGCCTCTCAAACTGCTGGGATTACAGGCACGCGCCACCACGCCTGGCCT 666
Query 73 -------------------------------------------------------------------------- 72
Sbjct 667 ATTTTATTTTATTTTGAGACAGAGTGTCACTCTGTCCCCCAGTCTGGCGTGCAATGGTTTGATCTCGGCTCACT 740
Query 73 -------------------------------------------------------------------------- 72
Sbjct 741 GCAACCTCCACCTCCCGGGTTCAACCTCCTGCCTCAGCCTTCCGAGCAGCTGGGACTACAGGAGCCTGCCACCA 814
Query 73 -------------------------------------------------------------------------- 72
Sbjct 815 CATCTGGCGAATTTTTGTATTTTTAGTAGAGAAGGGGGTTCAGCATGTTGTCCAGGTTGGTCTTGAACTCCTGA 888
Query 73 -------------------------------------------------------------------------- 72
Sbjct 889 CCTCAGGTGATCCAGCCACTTTGGCCTCACAAAGTGCTGGGATTATAGGCAAGAGCGATGGCGCCCGGCCCACT 962
Query 73 -------------------------------------------------------------------------- 72
Sbjct 963 CAGCAGGATTCCTAGAATGGGCACGAGCTCTGCCCTCATCACAGTCCAAAAGTGAGCACCTGCCTGGAGCTGCC 1036
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1037 CAGAAACAGCCTTGTGGGGTGGGGTTGGTGTCTGACCTCCCTCCCCGGGGGCCTTCGCAGGCTTCTCTGCTGGT 1110
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1111 GCTTCTGTGCCTGTGGGTCTGGATTCCTCCAGGGCCTGATCCTGGGTGCAGATGCAGCTGGAAGCCCTGAACCT 1184
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1185 GCTGCACACACTAGTCTGGGCACGGAGTCTCTGCCGTGCCGGAGCTGTGCAGACACAGGAGCGGCTGTCAGGCA 1258
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1259 GTGCCAGCCCTGAGCAAGTGCCAGCTGGTGAGTGCTGTGCTCTGCAGGAGTATGAGGCCGCCGTGGAGCAGCTC 1332
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1333 AAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGC 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 CAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATG 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 AGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAG 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 ATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGA 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 GAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCA 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 GGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTG 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 GCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 GGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCA 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 TCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAA 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 GCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCT 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 GTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCA 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCC 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 AATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 GATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAACCCCAGTC 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 ACGTGTCACACGGAGGATCAAGTCCTGCTGGTCGGCCGTGGCTGACTCTTCAGGCACGTTGGGCTCCTGGGTCA 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 GCTGCTGCCGTTCGACGCTCCCTGGAGCCCTGACTCAGGTCCTTCCCAGAGAGGCAAGGCTGGGGCCCTGCTGA 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 GCCTCTGCTGAACCCGGGCCCCCGAGGTCCTGCTTCTGGCTCGCATGGCCATAATCTTGACAGGGACTCTGGGT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CCCGCATCCCTGCTCCCAGCACAGCGGGGCTCAGGTAGCAGGAGGGAGTGGTGTTCCCGGCACTGCCTATCAGG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 CTGGGCGAGGGTCAGCGGGGAAGTACCACACAGGGCAAGAACAGAGGCCCGAGAAGCCGGGCGGGGGGCAGCTG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GGCGTGGTGGGGCAGGCAGGCGGGTGACCAGGGCTGTGGCTGCGTTCTCCCCATGTTTCCTGTGCTCACAAGCT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GCCGCTTTAGATTCTCCCAAAAAGTCTCCCCGAGGGGGCTGAGGAGCCCCCGTTGCCCTCGGGGCATCTCAGCT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GGCAGCCCCAGCGTTTCCTTCCCCATCCCTGTCCTACAGATTCATGCTGGTCCTGGCCAGCAATCTGCCTGAGC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGC 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 AGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 AGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTGTAGGCACTGGCTAGGGAGGG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATTTTCCGTCTGGCTCACAGGGGGAGGGTGAG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GCTTTGTACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGCTGGCTGAGCCCCTGGGGCAGAAGGAGTGG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GGCAGGCGGGGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTGAGGGGGGGCCTGCCAGGACTAGACAGAAG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGGGGCGGCCTGAACCCTGCTTCCAGCCATGGCCAGGGGCCACGGAACCCGGCAGGGGTGTCTGAGGCCGCCCT 3848
Query 73 ------------------------------------------------------------------------- 72
Sbjct 3849 GTCAGCTGGCCGGTCCAAGCCTGTGGCTGGAGCTGGTGTGTGTTTATCTAATAAAGTCCCACAGGTGCCTCAC 3921